Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0465 ATGGGTGAGAATGCCACCGTCACagccaacaacaacaacggCAACAAGAAGAGCCTTCTCTCGCTCCTAACAGAACCAATCCAATGGGTGAGAATGCTCTCCTCACAGCTGCACCCAACCTTCGTAATCGGCGTGTTCGTAGTTTACGGGCTGGGTCCAAGGCCTCTCGGGCTCGCTCTTCAAGGTCGCCGCAGACTACTACTGGAAAGACGTGCAGAAAGTGCAACCCTCCACCGTGCAACTCTACGTGGGCTTGTACTTCATCCCTTGGGTCCTCAAACCCCTCTGGGGGATCCTCACCGACGCGTTCCCGTCCGGGGGTACCGCCGGCGACCGTACTTCGTCATCGCCGGCGTGCTCGGCACCGTCTCCGCCGCCGCCGTCGCGCTCGAGGGGAAcctcgccgccgccgccgcgcTCCTCTGCTTCCTCGGCGTGTCGGCGTCGCTCGCGATCGCTGATGTCACCATCGATGCGTGCATCGCAAGGAACAGCATCGAGGTGAGGGCGCTCGCGCCCGATTTGCAGAGCCTCTGCGGGTTCTGCTCGGCGCCGGCGCGCTCGTCGGGTACCTCGCCAGTGGGTTCTTCGTGCACCATCTTGGTCCCCAGGTACAAGACGAAACCACAAGATTTCaagaattttgtgattttgtttttcGTTTGTGCGGGGTCGCTGGGTCTTATGGCGCTTGCTCCAGCTTTGACAATTGTGCTGGGTTTTGTGATTTATGAGAACAGAGCAAGTGGGTTGCATACTGAAAAGAAGCAGGTGGAGGAAGAGAGTGTAGGAATGAAGATTAGAAGCATGTATCAAACAATGATGTATCCTCAAGTGTGGAAGCCTTCTCTTTACATGTTCCTTGCTCTAGCTCTTAGTGTAACCACTCACGAAGGCCATTTTTATTGGTATACAGATCCAAGAGCGGGCCCTGCATTCTCTCAGGAGTTTGTGGGGATGATCTATGCAATCGGTGCAGTGGCTTCATTAATAGGAGTTGTAATCTACCACAAGGCTCTAAAAGACTACTCATTTAGAGACCTAGTATTCTATGCACAACTCTTCTATGGCATATCTGGTGTACTGGACTTGATCTTCATTCTCCGTTGGAATTTGGTTATTGGAATCCCTGACTACTTCTTTGTTGTCATTGAAGAAAGTGCTACAAGAATCACAGGCAAAATCAGATGGATGCCCATGATGGTACTGAGCACCCAGTTATGCCCTTTAGGCATTGAGGGCACATTTTTCGCTCTGTTAATGTGCATTGATAGCATTGGCGCCCTATTCTCCAGATGGGGTGGAGGGGTGCTTCTTCGTCTCCTCCACGTCACTAGGACTGACTTTACAAACCTTTGGTTGGCTGTTCTTATAAGGGACATGCTTAGGTTTGCTACACTTGCTTTGGTGTTTCTTGTCCCTAAGGCAGGTCAATATGAGGGACTGCTTCCTTCTGAGATTTTAGAAAAGAATGCTAGTGATAACGTAGAGGAAGAGGCCTTGGAGCTTGTCCCCATCAATGGCAAGACAGaagtttag 1539 0.4925 MGENATVTANNNNGNKKSLLSLLTEPIQWVRMLSSQLHPTFVIGVFVVYGLGPRPLGLALQGRRRLLLERRAESATLHRATLRGLVLHPLGPQTPLGDPHRRVPVRGYRRRPYFVIAGVLGTVSAAAVALEGNLAAAAALLCFLGVSASLAIADVTIDACIARNSIEVRALAPDLQSLCGFCSAPARSSGTSPVGSSCTILVPRYKTKPQDFKNFVILFFVCAGSLGLMALAPALTIVLGFVIYENRASGLHTEKKQVEEESVGMKIRSMYQTMMYPQVWKPSLYMFLALALSVTTHEGHFYWYTDPRAGPAFSQEFVGMIYAIGAVASLIGVVIYHKALKDYSFRDLVFYAQLFYGISGVLDLIFILRWNLVIGIPDYFFVVIEESATRITGKIRWMPMMVLSTQLCPLGIEGTFFALLMCIDSIGALFSRWGGGVLLRLLHVTRTDFTNLWLAVLIRDMLRFATLALVFLVPKAGQYEGLLPSEILEKNASDNVEEEALELVPINGKTEV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0465 512 CDD MFS_FBT 103 471 - -
Ssu5g0465 512 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 8 52 IPR039309 -
Ssu5g0465 512 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 103 506 IPR039309 -
Ssu5g0465 512 PANTHER FOLATE-BIOPTERIN TRANSPORTER 6-RELATED 8 52 - -
Ssu5g0465 512 SUPERFAMILY MFS general substrate transporter 108 458 IPR036259 -
Ssu5g0465 512 PANTHER FOLATE-BIOPTERIN TRANSPORTER 6-RELATED 103 506 - -
Ssu5g0465 512 Pfam BT1 family 103 184 IPR039309 -
Ssu5g0465 512 Pfam BT1 family 283 477 IPR039309 -
Ssu5g0465 512 Gene3D MFS general substrate transporter like domains 105 473 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0465 Ssu-Chr5 9816129 9819794 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0465 - - gmx:100806186 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0465 5 9816129 9819794 Ssu5g0465 5 9816129 9819794 ECH