Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0464 ATGGCTAATCGGCACACGATTATTCTAATGCAGACCTCTCAGAACAGAGCAACTAGGACCTTCATGGATTATGAATCTATAACTCAGGCCATGGATGGCATATGTGCACTGTATGAAAGGAAACTGAAGGAGTTGAATCCGGCCATCAGAAATCTCTCTTATGATATTACTGATCTCTACAACTTCATAGATGGTCTTGCGGACATGAGTGCCCTAGTGtatgtctctctttctctaactcTCAAAAATCATGTgcataaatatttcattaatttggtcagagttttttatttaatttttatttgtaaggcAGTCACAGCTTCGTTgatatttcaaaaaagaaaaatgaggtaG 354 0.2966 MANRHTIILMQTSQNRATRTFMDYESITQAMDGICALYERKLKELNPAIRNLSYDITDLYNFIDGLADMSALVYVSLSLTLKNHVHKYFINLVRVFYLIFICKAVTASLIFQKRKMR 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0464 117 Pfam Enhancer of rudimentary 4 88 IPR000781 -
Ssu5g0464 117 Gene3D Enhancer of rudimentary 3 95 IPR035912 -
Ssu5g0464 117 SUPERFAMILY ERH-like 4 86 IPR035912 -
Ssu5g0464 117 PANTHER ENHANCER OF RUDIMENTARY ERH 1 80 IPR000781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0464 Ssu-Chr5 9806518 9809521 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0464 - - gmx:548093 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0464 5 9806518 9809521 Ssu5g0464 5 9806518 9809521 ECH