Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0428 ATGAATAACGATTGGTTTTGGCTACCTTCGCTGTATTCGGATCCGGACATATCCACCTACTTGGAGCCCTTCGTGTTCCGCAACTCCCTGCGCTCGCATTTCCTGCATTCCTTGGTGGACGGTTCTAGAAGCTTCTACGTCCCGGGAAGTCTCGCGCTCGAGGACGCGTTCGGACACGTGTCGAAATTCGCCGGCGCGTTGCTGTTGTGGCTCTCGCGTGCGTCGAGCTCCAATGTGGCGCGGAACTTGGCGCGTTCCCTGCGCGCTTCTCCACCTCCTCGGTTTGGAATTGGTTCGAGTGGTGCGCAGGTTAAGACTGTGTCGAATGTGCGTGTGTTCGGGTTTCCGTTTCGATCGAGGAGGAAATCGTGCGCGCCTGCGAGGTTGGGGAGGATTTCGAGTTTGGCGATGAGGATGATTTGGAGAGAAGCGAAGAGGTTTCGGTCGTCGTTTCCTGTTCTGTCGCTGGCGGCCGCCATGGTGCCACCGTTTCAGAACTTGTCATCAAATGTACTAGCTGGCCCATTGCAGAATCCTGATGTGCAAATGTATGGAGCCATTGACCAAATGCCTAAGGAGGTTGAATGCCAAGGATCTCCATTCCTATCTTTTCTTGAGTTGAACCAGGCAAAACCTGTGGTGGAGCCTAAAACTGGCATTGAATTTCCTTTGGTTTTAGACAATATATTCACTGGAGAGAAGAATTACGGCTTCAACTCTGAGGTCCTGGTTGGAACAGGATCAAGAACCATGACAATTGTTAAAATCAAGTCACTGAAGGTCTATGCTTTTGGATTTTATGTTCATCCATACTCCCTCTGTGAGAAACTGGGGCCAAAATATGCATCAATTTCTGCTGATGAACTGAATAACCGTCATGACTTCTACAAGGATCTTCTCAGGGAGGATATCAATATGACTGTTAGGCTTGTTGTAAATTGCAGGGGTATGAAAATTAACAGCGTGAAAGaTGCTTTTGAAAAATCACTTCGAGCTCGATTAGTAAAGACTAATCCATCCACGGACTTTAATTGCCTAAGGACATTTGGTTCATACTTCACAGAGAATATCTCAATACCTttgGGAACAGTAATTGAGTTCAAACGAACAGTTGATGGACGTCTAATCACTAAAATTAGTGGCAATCAGATAGGAAGTGTCCACAGCAAAGATTTGTGTCGGGCTTTCTTTGACATGTACATTGGAGATGTTCCCGTGTGCGAACAGACTAAAAAAGAGATCGGCATGAACATTGCGAATATTATTAGGAGGTGCTAA 1278 0.4671 MNNDWFWLPSLYSDPDISTYLEPFVFRNSLRSHFLHSLVDGSRSFYVPGSLALEDAFGHVSKFAGALLLWLSRASSSNVARNLARSLRASPPPRFGIGSSGAQVKTVSNVRVFGFPFRSRRKSCAPARLGRISSLAMRMIWREAKRFRSSFPVLSLAAAMVPPFQNLSSNVLAGPLQNPDVQMYGAIDQMPKEVECQGSPFLSFLELNQAKPVVEPKTGIEFPLVLDNIFTGEKNYGFNSEVLVGTGSRTMTIVKIKSLKVYAFGFYVHPYSLCEKLGPKYASISADELNNRHDFYKDLLREDINMTVRLVVNCRGMKINSVKDAFEKSLRARLVKTNPSTDFNCLRTFGSYFTENISIPLGTVIEFKRTVDGRLITKISGNQIGSVHSKDLCRAFFDMYIGDVPVCEQTKKEIGMNIANIIRRC 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0428 425 Gene3D - 214 400 IPR016088 -
Ssu5g0428 425 Gene3D - 272 414 IPR016089 -
Ssu5g0428 425 PANTHER FATTY-ACID-BINDING PROTEIN 2 31 425 - -
Ssu5g0428 425 PANTHER FATTY-ACID-BINDING PROTEIN 2 31 425 - -
Ssu5g0428 425 SUPERFAMILY Chalcone isomerase 215 423 IPR036298 GO:0016872
Ssu5g0428 425 Pfam Chalcone isomerase like 242 414 IPR016087 GO:0016872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0428 - - gmx:100803025 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0428 5 8845343 8850881 Ssu5g0428 5 8845343 8850881 ECH