Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0416 ATGAAGATCATTGGAGAGCTACTATTATTTGTGATAGTTTCTTTTCTGCTGAACAGTGGATATGGAATTGAAATATCCAAGTACAGGGTGCCTGAAAAACAACCTTACAGAACTTCTTATCACTTTCAGCCCCAACAAAATTGGATGAATGGACCTATGTACTACAAAGGTGTTTACCACCTTTTCTACCAACATAATCCTGAAGCAGCAACCTTTGGTGATAAGATTGTATGGGGTCATTCTGTATCCTATGATCTCATCAATTGGATTCATCTGAATAATGCTATTGACCCAAGTGAGCCCTATGACATTAACAGCTGCTGGTCAGGCTCAGCCACTATAATCCCAGGGAAAGAACAACCTGTTATTTTGTACACAGGAATTGATGATAAGAGACATCAAGTTCAGAACATAGCTATGCCAAAGAATCTATCAGACCCCTTCTTAAGGGAATGGGTGAAACACTCTCAGAACCCTGTCATGACTCCACCAAGTGGAGTCGAAGTTGATAATTTCAGAGACCCTTCAACTGCTTGGCAGGGAAAGGATGGAAAATGGAGGGTAGTCATTGGTGCTCAAAATGGTGATGAAGGGAAGGCAATTCTCTACCAAAGTGAGGATTTTGTTAACTGGACAGTGGATCCCAATCCTTTTTATGCATCAGATAATACTGGAGTTTGTGAGTGTCCAGACTTCTTTCCTGTGTTCATCAATGGCAGCACAAATGGGGTGGATACATCTGTGCAAAATCCAAGTGTTAGACATGTCTTGAAGATAAGCTATCTAAGAAAACAGCATGATTACTATTTTCTTGGAACTAGTTCAGACTTGAGGTATGACTATGGTAAATTCTATGCTTCCAAGTCATTTTTTGACCATGCTAAAAACAGAAGGATGTTGTGGGGATGGGTGAACGAGTCTGACTCCACACAAGATGACATTGAGAAAGGATGGGCTGGTCTACAGTCAATTCCAAGACAAGTTTGGCTTGATAAAAGTGGGAAGCGATTGGTGCAGTGGCCAACTGAAGAGGTAGAAAAACTACGTGACAAGCAAATCAGTATAACGGGAGAGAAACTTGTCCACGGATCAAATCTTGAAGTCTCAGGTATCACTGCATCACAGGCCGATGTAGAAGTGTTGTTTGAGCTATCTGAACTAGAAAATGCAGAGTTTCTTGATCTCAATGGAGTTGATCCCCAACTACTCTGTAGCCAAGAATATGCATCAAGCAGAGGCATAATAGGGCCATTTGGTTTGTTAGCTTTAGCTTCAAAGGATCTCAAAGAGCATACTGCAATCTTCTTCAGAATATATAGAGCAGCACCAAATAGATATGCATGCCTCATGTGCAGCGACCAAAGCAGGTCCTCATTGCGGCATGACCTTGACAAAACTACATATGGAACCATCTTCGACATAGACCCCTATCTCAAAAAGATTTCACTTAGAAGCTTAATTGACCACTCCATTATTGAGAGTTTTGGGGATGAAGGGAGAGTTTGCATCACCAGTAGAGTTTATCCATCATTGGCTATAGACAAAGATGCCCATCTTTATGTATTTAACAATGGAAGCCAGAGTGTGGTGATATCAAAACTGAACGCGTGGAACATGAAGGAAGCGGAGATTGGCCATGAGGGAAACATAAGCTATACCTAA 1662 0.4128 MKIIGELLLFVIVSFLLNSGYGIEISKYRVPEKQPYRTSYHFQPQQNWMNGPMYYKGVYHLFYQHNPEAATFGDKIVWGHSVSYDLINWIHLNNAIDPSEPYDINSCWSGSATIIPGKEQPVILYTGIDDKRHQVQNIAMPKNLSDPFLREWVKHSQNPVMTPPSGVEVDNFRDPSTAWQGKDGKWRVVIGAQNGDEGKAILYQSEDFVNWTVDPNPFYASDNTGVCECPDFFPVFINGSTNGVDTSVQNPSVRHVLKISYLRKQHDYYFLGTSSDLRYDYGKFYASKSFFDHAKNRRMLWGWVNESDSTQDDIEKGWAGLQSIPRQVWLDKSGKRLVQWPTEEVEKLRDKQISITGEKLVHGSNLEVSGITASQADVEVLFELSELENAEFLDLNGVDPQLLCSQEYASSRGIIGPFGLLALASKDLKEHTAIFFRIYRAAPNRYACLMCSDQSRSSLRHDLDKTTYGTIFDIDPYLKKISLRSLIDHSIIESFGDEGRVCITSRVYPSLAIDKDAHLYVFNNGSQSVVISKLNAWNMKEAEIGHEGNISYT 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0416 553 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 31 547 - -
Ssu5g0416 553 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 31 547 - -
Ssu5g0416 553 Gene3D Glycosyl hydrolase domain; family 43 45 354 IPR023296 -
Ssu5g0416 553 CDD GH32_Fruct1-like 47 330 - -
Ssu5g0416 553 SUPERFAMILY Arabinanase/levansucrase/invertase 33 341 IPR023296 -
Ssu5g0416 553 SMART glyco_32 41 499 IPR001362 GO:0004553|GO:0005975
Ssu5g0416 553 Pfam Glycosyl hydrolases family 32 C terminal 344 538 IPR013189 -
Ssu5g0416 553 Gene3D - 355 539 - -
Ssu5g0416 553 Pfam Glycosyl hydrolases family 32 N-terminal domain 41 341 IPR013148 -
Ssu5g0416 553 SUPERFAMILY Concanavalin A-like lectins/glucanases 341 541 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0416 Ssu-Chr5 8652486 8655313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0416 53 544 Glycoside Hydrolase AT3G13790 56.286 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0416 K01193 - gmx:100777487 1015.76