Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0411 ATGGCCGATCGTGGCAGTGAAAGGAGAGTTACGATACGAAACAATCATGGCGAAAATCTGGTGGGAATCTTACATAATGCGGCTTCAATTTCGCTTGTTATCGTGTGCCATGGCTTCCAATCTTCCAAGGAAAGGATTCCCATGGTGAACCTTGCTACTGCTCTGGGAAAAGATGGAATCAGTGCTTTCCGCTTTGACTTTGCGGGAAATGGGGAAAGTGAAGGTTCATTTCAGTATGGTAACTACTACAAAGAGGTTGAAGACCTGCGAGCTGTAGTTCAACACTTCCGTGAGCAGAAATACATAATTACAGCAATTGTTGGTCACAGTAAAGGGGGTAATGTGGTGCTCTTATATGCCTCAAAGTATAAAGATATTCATATTGTTGTGAATATATCTGGCCGGTTCAATCTAGTGAGAGGCATGGAAAGTCGTTTGggcaaaaattttatacaaaggaTCAAACAAGATGGATATAtagatgttaaaaataaaagagGGAAGATTATGTATCGTGTTACTGAAGAAAGTTTGATGGACCGCCTATCTACTATAACCCATCTTGCCTGCCTATTGATTCCCCAAGATTGCAGAGTGTTGACAATTCATGGATCCATGGATGAAACTGTACCTGCAGAAGAGGCTTTAGAGTTTGCTAAATTCATATCTAATCATCAATTGTGCATAATAGAAGGAGCTGATCATGAATATTCTTCTCATCAAGATGAGTTGACCAGCTTAGTTTTGGAATTCATCAAGATTCATACTGATAAAGACAAAGATACATCTAAGCAGACACGATTTGGAAGAGTACATAAACCTATTCATTCCAGATTTTAG 840 0.381 MADRGSERRVTIRNNHGENLVGILHNAASISLVIVCHGFQSSKERIPMVNLATALGKDGISAFRFDFAGNGESEGSFQYGNYYKEVEDLRAVVQHFREQKYIITAIVGHSKGGNVVLLYASKYKDIHIVVNISGRFNLVRGMESRLGKNFIQRIKQDGYIDVKNKRGKIMYRVTEESLMDRLSTITHLACLLIPQDCRVLTIHGSMDETVPAEEALEFAKFISNHQLCIIEGADHEYSSHQDELTSLVLEFIKIHTDKDKDTSKQTRFGRVHKPIHSRF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0411 279 Pfam Serine aminopeptidase, S33 31 142 IPR022742 -
Ssu5g0411 279 SUPERFAMILY alpha/beta-Hydrolases 7 253 IPR029058 -
Ssu5g0411 279 Gene3D alpha/beta hydrolase 3 276 IPR029058 -
Ssu5g0411 279 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 6 261 - -
Ssu5g0411 279 PANTHER RE40534P-RELATED 6 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0411 Ssu-Chr5 8573509 8577211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0411 12 125 Acyl Lipid Metabolism Gene Families AT2G39410 30.579 3.85e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0411 K06889 - gmx:100776424 511.146