Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0408 ATGCTTGAGGAATCGGTCTCATCCACCCCCACATTCTTGGGCAGCCTCTACAGCTGGTTCACCCCCACTGTCTTCTTCCTACTCCTCCAACTAGTAATTGGAgccattttcatcatttcaaaCATTGCCAACACCCACAGAAATCAACAACAAGACCCTCAAGCACAACACCACCACCCACATGACTTCCCACACCACAACCTTCCTAGATCCCCTTCCATGTTGCAAAGGCTCAAATCCATCAACTTCTACCCCTCCCCTCACAGATCCCAAGACCCCCCAAACCCCCATTTTCACGAAAACCAACACCCCCAACTCGCTAGATCTCCCTCCGTTCTCCAGAGACTCAAATCCATCAACCTCTACAGTTACTTCCCCACGGAATCCTTCACTTCCAAACTCACACCCGACACCACCCACGAACCGCACGTGCGAGAACAATCACAACAACAAGTGGTGGAAACGGacgaggaagaagaagaggatgaTGAGTATGTTGTCTCCGACGACGACAATTACAAATTTGCCCTCGAGGAGGGTTCGTCGATGGACGAGGTTTACAGCAAGTTGCAGGGGCAGGAGGGTCATTTCGCGAGGACGCACTCCGACACCAAGCCGGACTCCGGCGAGGTCCCGGTGAGGCTGCCGCGGAAGATGAAGAAGTCGGCGAGCAGCAAGTCGGCGTTCGCGCACTTCAAGGAGGAGGACATCGTCGAGAGTCGCCGGCCGGCCACCGTGAGGGAGGCGAAGGTCGCCGGCGCCGCCGTGGACGACCACGAGGTGGATGCCAAGGCCGACGACTTCATCAACAGGTTCAAGCAGCAGCTGAAGCTGCAGAGGCTGGATTCCATCATGAGGTACAAAGAAATTATTACCAGAGGATCTGCCAAGTGA 894 0.528 MLEESVSSTPTFLGSLYSWFTPTVFFLLLQLVIGAIFIISNIANTHRNQQQDPQAQHHHPHDFPHHNLPRSPSMLQRLKSINFYPSPHRSQDPPNPHFHENQHPQLARSPSVLQRLKSINLYSYFPTESFTSKLTPDTTHEPHVREQSQQQVVETDEEEEEDDEYVVSDDDNYKFALEEGSSMDEVYSKLQGQEGHFARTHSDTKPDSGEVPVRLPRKMKKSASSKSAFAHFKEEDIVESRRPATVREAKVAGAAVDDHEVDAKADDFINRFKQQLKLQRLDSIMRYKEIITRGSAK 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0408 297 MobiDBLite consensus disorder prediction 83 103 - -
Ssu5g0408 297 PANTHER COTTON FIBER (DUF761) 1 93 - -
Ssu5g0408 297 PANTHER COTTON FIBER (DUF761) 97 296 - -
Ssu5g0408 297 MobiDBLite consensus disorder prediction 133 162 - -
Ssu5g0408 297 Pfam Cotton fibre expressed protein 259 293 IPR008480 -
Ssu5g0408 297 PANTHER OS06G0566500 PROTEIN 1 93 - -
Ssu5g0408 297 PANTHER OS06G0566500 PROTEIN 97 296 - -
Ssu5g0408 297 MobiDBLite consensus disorder prediction 48 71 - -
Ssu5g0408 297 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0408 Ssu-Chr5 8526218 8527111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0408 - - gmx:100775337 394.815