Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0397 ATGGAGTTAAATGCAAGTTTTGACGTCGAACATTCACATTCTACGCAAAGAATACAGCATGAGCTGTGGCCTCTAGATCCAATTGATCCAAAGAAGGCAAAGTTCCCATGTTGTTTGGTTTGGAATCCACTTCCTGTGGTCTCATGGTTGGCTCCCTTCATTGGTCATGTTGGCATTTGCAGGGAGGATGGAGTTGTTTTAGATTTTTCAGGATCATATCTTGTGAATGTTGATGATTTTGCATTTGGTCCAGTTGCAAGATACTTGCAACTTGATCGTAGACAGTGTTGCTTCCCCCCCAACCTGTCTGCACATACATGCAAGCACGGTTACCAGCATTCTGAGTATGGTACTGCAATCACATGGGATGATGCTTTACAGTCAAGTTTGCGGTATTTTGAGAACAAAACTCACAACCTTTTCACTTGCAACTGCCACTCGTTTGTCGCCAACTGTCTGAATCGGCTGTGTTATGGTGGATCAATGAGTTGGAACATGGTGAATGTAGGAGCTTTGGTACTATTCAAGGGACACTGGGTTGACTTCAGGTCAATTGTAAGGTCTTTCCTGccttttgttgtggttgtttgCTTAGGTGTTTTCATGGTTGGGTGGCCCTTCTTTCTTGGGCTACTATCCTTGTCTCTACTCCTAATGGGGTGGTTTCTATTGGGTACTTACCTTGTTAGAAACCTATTAGAGTGCTAG 708 0.4251 MELNASFDVEHSHSTQRIQHELWPLDPIDPKKAKFPCCLVWNPLPVVSWLAPFIGHVGICREDGVVLDFSGSYLVNVDDFAFGPVARYLQLDRRQCCFPPNLSAHTCKHGYQHSEYGTAITWDDALQSSLRYFENKTHNLFTCNCHSFVANCLNRLCYGGSMSWNMVNVGALVLFKGHWVDFRSIVRSFLPFVVVVCLGVFMVGWPFFLGLLSLSLLLMGWFLLGTYLVRNLLEC 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0397 235 Pfam Protein of unknown function (DUF778) 95 179 IPR008496 -
Ssu5g0397 235 Pfam Protein of unknown function (DUF778) 44 93 IPR008496 -
Ssu5g0397 235 PANTHER PROTEIN REVERSION-TO-ETHYLENE SENSITIVITY1 1 235 - -
Ssu5g0397 235 PANTHER UNCHARACTERIZED 1 235 IPR008496 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0397 Ssu-Chr5 8374619 8376206 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0397 K20726 - gmx:100817575 468.003