Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0387 ATGAACCCCAACCACCCCGTCCCTCCGTACCAACCCATGCTCAAGGAATCCATCAACCGTTTCCTCGCCGAACGCCGCAGAGGCGCCACCGACTTCGCCGACTTCGCCTCCATCTTCTCCCGCGCGCTCCGCGGCGCCCCCGACCCCCCGATCCCAATCCTCTGGTTCTACGCCGCCCTCGCGCGAGAGCCTTCCGGAACGTCGTCCTCCGCGGCCAAGGACCTGTTCCAGTTGCTGGTGTCGCACTCGAGTGCCTGCGGGCCCGCGAAGAGGATCGCCGCGCTCGCGCCCCTGCTCTTCGAGCTGCACCGCCTGGCGCTGGGCGAGGGAAGGCTGAGGGGCGAGGCGGAGGGGCTGGTGGAAGGGGTCGTTGGTTACTGCAGCATTCTTTGCGCCGGCGACGATGACGTGGCGGTTTTGGACCTCGCGGACTTGATTGAGGTGTGGATGGCGGACGGGGATTGTTGCGTGAAGGGGTTTTTCCCTCTGGTGAGTGACGGGGTTCGGAGGGGGATCGAGAGGGGTTGCGAGGTTGGGGTCTTGGCCGGGGTTGTTATGTGTGAAGCGCTTTTGCTGAAGCTGTGTTTGGCGTTCGAGACGGGGGTTACCCGAGCGGAGCAGGAGAAGAAGTTGCTCGCTTCCGCGGTTCAGACCATCACAGGGTTTCGGAGTTTTCGCTTTTTGGATACCCTTTTCAGGATGATGTTGGAGCCAGTTTTGCCAGTGACCTCTGTACTGGGTTCTGAAGACGAAGTGCTTTTAAAAGAGGTCCTGTTCAATTCTGTGATGATGACAGAGTATTCATTCATTAATCCTCAACCAGAATTTTCACTATATGCCAACAGCTTGAAAGATGTTGCTATAACTTGGTTGTTTGTTGCTGAGTTAGCTGTACAGTCTGCTAGGGAAAAAGGTGATCAGGGGAAAGCTATGTCTTATATAAATGCCTTCTGTAGATCCTGCATACCCATTCAATTGATCAATTGGGTTATTAATCAAAATTGCGTAGGCAGAAAGATCAGCAGACCAAACGTTTCCACTCCCATAGCTCTTATAAAGTGGCTTCTAGTTGTTGAGGAGCAAGGATTTTCAGTATTTGGTGGTGAAACTGCCAAGCAGATAAATTTCATGTTCAAAACTAACTTTTTCACTTCAAGAACCGAGTGCTTGCTTCCAGTGATCAAACATTTCTTTAACAATCTGGATAAGAATCTTTTTTTGAATTCTATAAATGGAGAAGCTGGGGCAGATAAACTTGATGGTGATGTAGAGATGCTTGATACTGTGGACACTGTAAATTTGGCTGCTGCGGATAGTCTGAGCACAACCTGCATTGATGGAACAAGAAAACGCAAAGAAGGGATTGATGATGATACTAAAACACAACTAAAGTTTATGAGATGTCAATTTCATGAGAATTCGGTCAGAGAAAACTCATTTATATTCAGGCAACAATGA 1458 0.5048 MNPNHPVPPYQPMLKESINRFLAERRRGATDFADFASIFSRALRGAPDPPIPILWFYAALAREPSGTSSSAAKDLFQLLVSHSSACGPAKRIAALAPLLFELHRLALGEGRLRGEAEGLVEGVVGYCSILCAGDDDVAVLDLADLIEVWMADGDCCVKGFFPLVSDGVRRGIERGCEVGVLAGVVMCEALLLKLCLAFETGVTRAEQEKKLLASAVQTITGFRSFRFLDTLFRMMLEPVLPVTSVLGSEDEVLLKEVLFNSVMMTEYSFINPQPEFSLYANSLKDVAITWLFVAELAVQSAREKGDQGKAMSYINAFCRSCIPIQLINWVINQNCVGRKISRPNVSTPIALIKWLLVVEEQGFSVFGGETAKQINFMFKTNFFTSRTECLLPVIKHFFNNLDKNLFLNSINGEAGADKLDGDVEMLDTVDTVNLAAADSLSTTCIDGTRKRKEGIDDDTKTQLKFMRCQFHENSVRENSFIFRQQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0387 485 PANTHER OS01G0600300 PROTEIN 2 483 - -
Ssu5g0387 485 PANTHER SNF2 DOMAIN PROTEIN 2 483 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0387 - - gmx:100814552 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0387 5 8221313 8226580 Ssu5g0387 5 8221313 8226580 ECH