Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0381 ATGGTTCAAGCGAGGGTAAGCGAGAGCCGCCAGATAAGTGATCTACGATACATTTCTCTGGAGAAATTGCCGAATTTCGGAACTCTGGAGTCTCTGCTAGATTACAGAGACGATAATGTCTTGCCTGAGTTTGAATTTGTGGCCACGCAAGGGGAGATGGATAAAGAGTCACATAGCAACAATCACAACCATGGCAATGGCAACAATATTGCTAGCGTTAGAGAAAGAGACAAAAGCGGAGTAGGCGATGGGCCCGGGTCGTTGTTACTGAGGGCAAGTTCCGATGGTATGAGGCAATCAACGACGTCGGATTTGGTGCTGCAGTGGGGTAATCGGAAGCGACTAAGGTGCATGAAGGTGCAGGTCAAACACGACTCTTCTTCCAACCCGGTTCAGAGAACAACGGTTCGGGTGGATCGGCGGGTAGTTAGAACCGAGAAAGATTCTTCAAATACTAGATCCTTGCCCATACCCTCCGTtactaataacaacaataataattgtcataatagttttaataataatcagaGTAACGGGTATCTGAATCTCCGTCAACGCCCCCCTTCCCCGCAGCAACTTCCTCCGCGCATTCTCAGGAATTCGGAGACTTCAAGTGCTATGAGAGGAGGCCAAAGCAACGGGAGTGTTAGGGGAATTGCCTCACCGGACAGGGGTGCGCACGATAAGAGGGGGACCCATAACAACCACcttaatgacaataataacaaGTCTCTGGTCTCATCAGACACCGCGCACGATAGCAAAAAGGGTGGGGGGTCGCCGTCGGGCAGTGGGGACGCGGCTCCGCCGGTGTGGCCGCCCAAGTTCGTGATTGCCTTGACCAAcaaggagaaggaagaagatTTTCTGCTCTTAAAGGGTTCAAAGCTTCCTCAGAGACCCAAGAAGAGAGCCAAATTCATACAACGCACCCTCAATCTTGTAAGTCCAGGTACATGGCTATGCGATCTTACTCTGGAACGATATGAAGTTAGGGAGAAGAAGATATCCAAAAAGAGACCAAGAGGGTTGAAAGCAATGGGCAACATGGATTCCGACTCTGAATAG 1068 0.47 MVQARVSESRQISDLRYISLEKLPNFGTLESLLDYRDDNVLPEFEFVATQGEMDKESHSNNHNHGNGNNIASVRERDKSGVGDGPGSLLLRASSDGMRQSTTSDLVLQWGNRKRLRCMKVQVKHDSSSNPVQRTTVRVDRRVVRTEKDSSNTRSLPIPSVTNNNNNNCHNSFNNNQSNGYLNLRQRPPSPQQLPPRILRNSETSSAMRGGQSNGSVRGIASPDRGAHDKRGTHNNHLNDNNNKSLVSSDTAHDSKKGGGSPSGSGDAAPPVWPPKFVIALTNKEKEEDFLLLKGSKLPQRPKKRAKFIQRTLNLVSPGTWLCDLTLERYEVREKKISKKRPRGLKAMGNMDSDSE 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0381 355 MobiDBLite consensus disorder prediction 52 105 - -
Ssu5g0381 355 MobiDBLite consensus disorder prediction 336 355 - -
Ssu5g0381 355 MobiDBLite consensus disorder prediction 222 236 - -
Ssu5g0381 355 MobiDBLite consensus disorder prediction 195 218 - -
Ssu5g0381 355 Pfam Protein of unknown function (DUF1639) 280 329 IPR012438 -
Ssu5g0381 355 MobiDBLite consensus disorder prediction 149 187 - -
Ssu5g0381 355 PANTHER PUTATIVE (DUF1639)-RELATED 53 355 - -
Ssu5g0381 355 PANTHER INTEGRATOR COMPLEX SUBUNIT 6 HOMOLOG 53 355 - -
Ssu5g0381 355 MobiDBLite consensus disorder prediction 120 271 - -
Ssu5g0381 355 MobiDBLite consensus disorder prediction 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0381 Ssu-Chr5 8125765 8135920 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0381 - - gmx:100784851 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0381 5 8125765 8135920 Ssu5g0381 5 8125765 8135920 ECH