Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0304 ATGTCGAAACTCAACGAAGCACCACAAAGCTACCAAAGCGTGGCACTGGTTTTAGGCGTGACAGGCATCGTGGGCAGCAGCCTTGCCCAGATTCTACCTCTTCCTAACACACCCGGTGGTCCATGGAAGGTTTACGGTGTGGCTCGCCGTACCCAACCAAGTTGGAACGCGGACCACACCGTGTACTACATCCAGTGCGATGTCTCCGACCAAAACGACGCCGAATCGAAGCTCTCATGTTTAACCGACATCACTCACATCTTCTACGTTTGCTGGACCAGCAGGCCCACGGAGGCCCAAAACTGCGAAATCAACGGTGGCATGTTAAGGAACGTCCTACGCGCTGTCATCCCAAACGCTCCCAAACTGCGCCACGTGTCCCTTCAGACAGGCGCCAAGCACTACGTAGGACCTTTCGAGCTGTTCGGTAAGATTGATCCCCATGACCCACCCTTCACGGAGGACTTGCCACGACTTGACGCACCGAATTTCTATTACACCCAGGAAGATATCTTGTTCGACGAGGTTCGTAAGAAGGAGGGGTTAACGTGGTTCATTACCCGACCGCATGTGATATTTGGTTTCTCCCCTTATAGCTTGATGAACCTCATTGTGACACTCTGCGTTTATGCCGCTATTTGCAATCACGAGGGTGTTCCCCTGTGGTTTCCCGGGACCAAAGCTGCGTGGGAGTGTTATTCCACGGCTTCGGATGCTGATTTGATTGCGGAGCAGCACATTTGGGCTACGGTGGACCCTCATGCGAAGAACGAGGCTTTTAACTGCAGCAACGGGGATGTGTTCAGATGGAAGCATCTGTGGAAGGTGTTGGCGGAACGGTTTGGGATAAAGGATTATGGGTTTGTGGAAGGGTCGGATTTGAGGTTGTCGGAGATGATGAAGGATAAGGGTGCAGTGTGGGAAGAGATTGTGAGGGAGAATAAGTTGCTTCACACAAAGCTTCAAGAGGTTGGGGACTGGTGGTTTTCGGATGTTATCTTGGGAATGGAGCCCGTGTTGGATAGCATGAACAAGGCTAAAGAGCACGGGCTTTTTGGATTTAGGAACTCTAAGAATTCGTTTGGAAGTTGGATAGATAAGACCAAAGCTTACAAGATTGTGCCGTGA 1128 0.5115 MSKLNEAPQSYQSVALVLGVTGIVGSSLAQILPLPNTPGGPWKVYGVARRTQPSWNADHTVYYIQCDVSDQNDAESKLSCLTDITHIFYVCWTSRPTEAQNCEINGGMLRNVLRAVIPNAPKLRHVSLQTGAKHYVGPFELFGKIDPHDPPFTEDLPRLDAPNFYYTQEDILFDEVRKKEGLTWFITRPHVIFGFSPYSLMNLIVTLCVYAAICNHEGVPLWFPGTKAAWECYSTASDADLIAEQHIWATVDPHAKNEAFNCSNGDVFRWKHLWKVLAERFGIKDYGFVEGSDLRLSEMMKDKGAVWEEIVRENKLLHTKLQEVGDWWFSDVILGMEPVLDSMNKAKEHGLFGFRNSKNSFGSWIDKTKAYKIVP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0304 375 Gene3D - 12 375 - -
Ssu5g0304 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 284 IPR036291 -
Ssu5g0304 375 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE-LIKE 5 375 - -
Ssu5g0304 375 CDD 5beta-POR_like_SDR_a 14 315 - -
Ssu5g0304 375 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 5 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0304 Ssu-Chr5 6487629 6488756 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0304 K22419 - gmx:100813467 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0304 5 6487629 6488756 Ssu5g0304 5 6487629 6488756 ECH