Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0220 atgtaccgAATCTCTTTGAGAACCCGACCCCTCCTTCGCTTCCCTCGTCCTCGCACCATTTCTTCTTCACGAAAACCTATCAtcaattcaacaaataaaagtgtagaaaattcccaaattgCCCCTCCACCTATCCCCGATCACCGCCACACGCTCTCTCCCATCCCTCCGTCGCAATCTCCCTCTCGCACCTCCGTCGTCGCTCTCTCCGCCGCCGTCGCATCTGCCGTATTTGCCTCCGCCGCGCTCCTCTCCTCCAATTACAGCCGTGAACACAACTCCGATCGCAGCGGCGCCGCCAATCCTCTGTACGCGGGCGCGGAGCACGCCGCGCGCAAGGCGGCGGAATCCTTCGACCGAATTTTCCACCACGCGAAGCGCACCGGCGTCGCCGCCTCGGTCCTCTGGCAGTCGCTGCGCTCGGTGCTGTCATCGGCGAACCACGAGGTCCGCTCCGGGTTCGAGATTCGCGTCGCGGCGCTGCTGGCGGACATCGCCGCCGCGAACTCCGGTCGCAGGGCCTCGATCGTCGGGGCTGGAGGCGGCGCCGTCGTTGACTGGCTGCTGGAGTCTGTGGCGGTGGCGAAGGACGGCGGCGGCACCCAGGCGGAGTCGGCGAGGGCGCTGGCGTATCTGATTGCGGACCCTAACGTGTCTGCGGCGGTGCTTGGACGGCCTCACGCGGTTCCGAATCTTCTGAGGTTCATCTTCTCGGGCCAGCCTCGGCTTTCTAAGAATAAGAAGGCAGGAGCATGCTTGTGGCTGCCATTATGGACATTGTTACGGCCAGCTGTGACAATGCAGAAGAGGTATCTTTTATGCCATCATTGCCTGGAAATGCTGAAACCAGAGACATTGCTGCAGCCCTACAAGTTATTGAGGAAGGGGGTTTGCACTTGGATGAGCCACCTGAAGGTGAAGATGATGATGGTGGGACGGGAGGGAATGGAATTGGAATCAAGATACTTGAAGGTACCCCTGTTTTAG 987 0.5816 MYRISLRTRPLLRFPRPRTISSSRKPIINSTNKSVENSQIAPPPIPDHRHTLSPIPPSQSPSRTSVVALSAAVASAVFASAALLSSNYSREHNSDRSGAANPLYAGAEHAARKAAESFDRIFHHAKRTGVAASVLWQSLRSVLSSANHEVRSGFEIRVAALLADIAAANSGRRASIVGAGGGAVVDWLLESVAVAKDGGGTQAESARALAYLIADPNVSAAVLGRPHAVPNLLRFIFSGQPRLSKNKKAGACLWLPLWTLLRPAVTMQKRYLLCHHCLEMLKPETLLQPYKLLRKGVCTWMSHLKVKMMMVGREGMELESRYLKVPLF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0220 328 Gene3D - 101 269 IPR011989 -
Ssu5g0220 328 MobiDBLite consensus disorder prediction 33 60 - -
Ssu5g0220 328 PANTHER - 1 248 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0220 K23504 - gmx:100775692 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0220 5 4583747 4585738 Ssu5g0220 5 4583747 4585738 ECH