Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0217 ATGAGCAGAGAGGAGTGTGCTTGCAATCCTGTCCGGTTTTTTTGCATATTGACAATGCAAAGATCTGGGAGTGGATGGTTTGAGACGTTATTGAACAGTCATATGAATGTAAGCTCCAATGGGGAGATATTTTTCCTGGCCAAAAGAAGGGACAAtgtttcttcaattttgaagaCAATGGATGAAGTGTTCAATCTTGATTGGTTCGGTGGTGCTTCCAAGAATGAGTGTTCGGCGGCTGTGGGCTACAAGTGGATGTTTAATCAGGTAGTTGAATGGGTGTCTTAA 288 0.4062 MSREECACNPVRFFCILTMQRSGSGWFETLLNSHMNVSSNGEIFFLAKRRDNVSSILKTMDEVFNLDWFGGASKNECSAAVGYKWMFNQVVEWVS 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0217 95 Gene3D - 10 95 IPR027417 -
Ssu5g0217 95 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 90 - -
Ssu5g0217 95 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 90 - -
Ssu5g0217 95 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 89 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0217 Ssu-Chr5 4567633 4567920 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0217 - - gmx:100819406 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0217 5 4567633 4567920 Ssu5g0217 5 4567633 4567920 ECH