Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0160 ATGAAGGCTACTCTGAAGGGCAAGTACGACGTCGACAAAAACGGCGGTGGGGTTGCCACTGTCGCCGTCAACGCCGCCGACGTTAAGCTCAGGGCTTCCGTAACGGAAGCCACTTTCGTCAACGGCCCCAGCCTCACCGGTTTGGCTCTCGCGGTCGAGAAACCCGGCTCCTTCATCGTCGACTACAATGTTCCCAAAAAGGACTTTCGGTTTCAGTTCATGAACACGGTTAGGGTTGGGGAGAGGCCGTTGAATTTGACTTACATGCACAGCAGGGGCGACAACCGGACCGTTTTGGACGGAACCTTTGTGTTCGATCCTGCAAACAAGGTTTCGGCCAATTACGCGCTCGACTCTGGGAACTGCAAGTTGAAGTACACTTATGTTCACAAGGGGTTGACCACGTTTGAACCTGCCTATGATGTGGCGAAGAACGCGTGGGACTTTGCCGTTTCGAGGAGGGTCTACGGCGATGACACATTGAAGGCCTCGTACCAGACGTCCAGCAAGGTGTTGGGAGTTGAGTGGTCGCGGAATTCCAAACACACTGCTGGCTTCAAGATTGTAGCATCCGTTAACTTGGCTGAGGAGTTTAAAGCTCCAAAACTTATTGCTGAGACCACATGGAATATTGAGATGTAG 642 0.5265 MKATLKGKYDVDKNGGGVATVAVNAADVKLRASVTEATFVNGPSLTGLALAVEKPGSFIVDYNVPKKDFRFQFMNTVRVGERPLNLTYMHSRGDNRTVLDGTFVFDPANKVSANYALDSGNCKLKYTYVHKGLTTFEPAYDVAKNAWDFAVSRRVYGDDTLKASYQTSSKVLGVEWSRNSKHTAGFKIVASVNLAEEFKAPKLIAETTWNIEM 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0160 213 PANTHER BNAA06G36970D PROTEIN 1 213 - -
Ssu5g0160 213 PANTHER OUTER ENVELOPE PORE PROTEIN 24A, CHLOROPLASTIC-RELATED 1 213 IPR034626 GO:0022843|GO:0034765
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0160 Ssu-Chr5 3161170 3163577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0160 - - gmx:100802815 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0160 5 3161170 3163577 Ssu5g0160 5 3161170 3163577 ECH