Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0158 ATGAAAAACGAAGATGCCACCGCCACACCCACAAACCCAAAGACAAAGAGAGAAAACTCTGATGGTGCGGGGAAGGGACACTACAAATTCTGGGTGTTAGCTGCTATTATTCTTCTTGCTCTTTGGTCCATGTTCACTGCTTCCCTCACTCTCAAATGGTCAGCTGGTAACCTCACCCGTGACTTCGACTCCACCACTCCCGACGATTTCGATGTCCTGGAAGTGGAGGAGAGGGAGAAGGTTGTGAGGCGCATGTGGGATGTGTATACTCAAAGTAAGAGTCACGGCAGCAGTGGGAGTGGGTTACCTCGTTTTTGGTGTGATGCTTTTCATGCGGCTTACGAGCACTTGGTCACTGATGTTCGGAGCGTCCAAGATGCTGCGGTTTCCGAAATTGCCAAGATGTCCCTCCGCTCTCTCAATTTGCACCTCAAATCAGACTCCCTTGTGGAGAATATCAAGGGATcaagaaaaatgaaacaagCAGAGAGTACCGTGGACACTACAGTTGGCAGTAACCAATAA 525 0.48 MKNEDATATPTNPKTKRENSDGAGKGHYKFWVLAAIILLALWSMFTASLTLKWSAGNLTRDFDSTTPDDFDVLEVEEREKVVRRMWDVYTQSKSHGSSGSGLPRFWCDAFHAAYEHLVTDVRSVQDAAVSEIAKMSLRSLNLHLKSDSLVENIKGSRKMKQAESTVDTTVGSNQ 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0158 174 MobiDBLite consensus disorder prediction 155 174 - -
Ssu5g0158 174 MobiDBLite consensus disorder prediction 1 17 - -
Ssu5g0158 174 Pfam Protein of unknown function (DUF1195) 6 143 IPR010608 -
Ssu5g0158 174 PANTHER OS03G0411600 PROTEIN 1 165 IPR010608 -
Ssu5g0158 174 MobiDBLite consensus disorder prediction 1 23 - -
Ssu5g0158 174 PANTHER PROTEIN, PUTATIVE-RELATED 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0158 Ssu-Chr5 3125424 3128606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0158 - - aprc:113874951 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0158 5 3125424 3128606 Ssu5g0158 5 3125424 3128606 ECH