Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0148 ATGCAAAATCTTAACCGTTTCGTCTCATTTTCTCTCCCTAACACGTTCTCTCCTCTCCTTCCACATCCTTCCGCTTCTCGAATCTTCTCCTTCCCCGCACCGTTTCACTCCGCTTCCGCAGGAGCTAAACAGTTGCTTGCTCAATTTTCAATGGACGGGATCCAAGGAATTGGTGCACATAACAAAAGCTCAGTGGATTTCGCTAGCAGTGATAGTGCCAAACGGCCACCAGTATGGTCATCATCTCCTAATTTTGGACCTAAAACTGATATAGGCAAACAGATCTTCTGTAACCGGCCATTGAATATGAAAAACATTGTTGCTGTGGGATTTGACATGGATTATACTTTGGCACAATACATTCCTGAAACTTTTGAATCTCTTGCTTATCAACGCACGGTTGAAAAGCTGGTTTATGATTTGGATTACCCTAGTGAGTTACTGACTTGGTCATTTGACTCAAGTTACATGGTTAGGGGCTTGGTTCTTGACAAAAAGAGAGGCAACATCTTGAAGATGGATCGTCACAAGTATGTGAAAGTAGCCTATCATGGTTTTAAAGAGTTGTCAAAAGAAGATAAAGTTGAAACATATGGAAATACTTTAGTACATGATTCTTTTGATGGGCCAGACTACGCTCTCATTGATACACTCTTTTCTCTTGCGGAAGCCTACTTGTTTGCTCAACTGGTTGATTTTAAGGACAGAAATCCTGGAAATATTCCAGAGCATGTTGATTATGCTCGTTTGAACAAAGATGTTCGAGATGCAGTAGATTTGTGCCACCGAGATGGAACATTGAAGCAAAAGGTTGCTTTAGATCCCAGAAGgTATATCAATGAAGACACTTCAATAGTTCCCATGCTTAAAATGCTTAGAGATTCTGGACGAGCTACATTTTTGGTGACAAACAGTTTATGGGACTATACAAACGTTGTCATGAATTTCCTCTGTGGATCTAGTAGGGCAAATGAAAGTACACAGTTTGACTGGCTTAAATACTTTGACATTGTCATCACTGGCAGTGCAAAGCCAAGCTTTTTTCTTGAGGAAAATCGTGCCAACCTGTTTGAGGTTGACCCTGAGAGTGGAATGCTACTTAATACAGATAATGGCTCTCCAATGGCTCAGgtgGGTAGTATCTCACCAAAGGTACTAAAGAAAGAGAAGGATTGTACTCGAAAAGTTTTCCAGGGAGGCAGCGTCGGTCACCTACATAATCTACTCTCAATAGAATCAAGTTCACAGGTTCTATATGTCGGGGATCACATTTATGGAGATATCCTACGCAGCAAAAAGGTTCTtgGTTGGAGAACAATGTTGGTAGTCCCAGAGCTCGAGAAGGAGGTTAAACTACTTTGGGAATTGAGGGATGCTCGCAAGGGACTTCAACATCTGAGGAGTAAGCGTGACCACATTGAGGATGAAATGCATTATTTGAACGAGTCTCTCAGATTAAAGAATCCAGATGAGGATACCAAGCAGAAGTTGAATTTGAAACTAGATAAATTGAAGcttgaaagagagagagtgcGATTAAGTCATCGAGAAGCTCAAAGAAAATTACACCAAAAGTTTCACGAGCCATGGGGCCAGCTGATGAAGACTGGTTATCAGAACTCTCGCTTTGCACATCAGGTTGAGCGATTTGCGTGCCTTTATACTAGCCATGTATCTAACTTGGCATTGTTCTCTTCAGACAAGTACTACCGGCCCAGTGAAGATTTTATGCAGCATGAATTTAGCATTTTGGAAAGCTAA 1761 0.4072 MQNLNRFVSFSLPNTFSPLLPHPSASRIFSFPAPFHSASAGAKQLLAQFSMDGIQGIGAHNKSSVDFASSDSAKRPPVWSSSPNFGPKTDIGKQIFCNRPLNMKNIVAVGFDMDYTLAQYIPETFESLAYQRTVEKLVYDLDYPSELLTWSFDSSYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFKELSKEDKVETYGNTLVHDSFDGPDYALIDTLFSLAEAYLFAQLVDFKDRNPGNIPEHVDYARLNKDVRDAVDLCHRDGTLKQKVALDPRRYINEDTSIVPMLKMLRDSGRATFLVTNSLWDYTNVVMNFLCGSSRANESTQFDWLKYFDIVITGSAKPSFFLEENRANLFEVDPESGMLLNTDNGSPMAQVGSISPKVLKKEKDCTRKVFQGGSVGHLHNLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVVPELEKEVKLLWELRDARKGLQHLRSKRDHIEDEMHYLNESLRLKNPDEDTKQKLNLKLDKLKLERERVRLSHREAQRKLHQKFHEPWGQLMKTGYQNSRFAHQVERFACLYTSHVSNLALFSSDKYYRPSEDFMQHEFSILES 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0148 586 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 24 586 - -
Ssu5g0148 586 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 24 586 IPR008380 -
Ssu5g0148 586 SUPERFAMILY HAD-like 93 582 IPR036412 -
Ssu5g0148 586 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 95 459 IPR008380 -
Ssu5g0148 586 Pfam 5' nucleotidase family 95 581 IPR008380 -
Ssu5g0148 586 Gene3D - 91 139 IPR023214 -
Ssu5g0148 586 Gene3D - 260 473 IPR023214 -
Ssu5g0148 586 Coils Coil 456 476 - -
Ssu5g0148 586 Coils Coil 494 521 - -
Ssu5g0148 586 CDD HAD_cN-II 96 556 - -
Ssu5g0148 586 PIRSF NT5C2 74 586 IPR016695 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0148 Ssu-Chr5 2973872 2980893 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0148 - - gmx:100814787 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0148 5 2973872 2980893 Ssu5g0148 5 2973872 2980893 ECH