Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0130 ATGGTAGCTAGTAACGCTTCATTTCAACATCAAGAGAGATATGAGGAAACGGACCCTGTTCAGGAGACAAATGATTTACATGAGCAACATGCAGGTGAGACTTCTTCCTTCACTCAAGTTGCCCTTGAACTCAATGAAGCAGTTAATCAAATGCAAAATATATTTGAAGCAGAGACCTCCGAAGGTGCTGCTACTAATATTGGTGACACTGACATAAAGGATAGGCAAAATAAAGATCAGTGCTGGGAAAAGTCAGAAAATGACTGCAATCTGGAAATGCTTGTTGAAGAAACAACTCCTGAGTCTGTAAAAATCTGCAAGGATGCAAAGGAGGCTAGGGTTGCATTAAATGAAGAGGTAGATGAGAATCGATCTAACTCCTCTAGTGAggaaaatttgtttgataatgAACACAATATAGAAGAATCTCAGATACCTAGTACATCTGATTGGAAATCAAGTCCCTTCAAAGAAGAGGAGGTTGAATCAATTCACAGCGATCTAAAGGAGAGTAATCAAACATCCATAATGATGGAAGAGAAGGAAGTGGATGGTACCTCACATAAGGAGGAGCAGGAAAAGGAACACCTCAAAAAACTTGATGAagcaaaagagagagaaagagaaagagaaaaggagaaattaGCTGTGGAAAGAGCAATTCGTGAAGCACGTGAAAGGGCATTTGCTGATGCCAGAGAAAGGGCAGCTCTAGAGAGAGCTGCAGCAGAAGCACGCCAGAAAAACATTTCTGATGGACGAGAAAGGCTAGGAAAAACTACTAGTCAGGCAAATGAGAAGACACCAGCTGAGAAGGCTGCTTTGGAAGCAAAACTTAAAGCTGAACGTGCTGCTGTGGAGAGAGCAACTGCAGAGGCACGGGCACGTGCCCTAGAAAGGGCACTCTCTGAGAAAGCTGCCTCTGATGCAAGAAATAAATCTGACAAATCTGTTGCAGGCCTTGGGGCTTCCCGTGATAATGGAATGAAGCAAAACTTCCATTCAAAATCTTTCAGCTATGGTGTTCGAGACGCTACTGATGTATTTGATGGAGCTAATGGCGATTCTGCTCAGAGATGTAAAGCTAGGTTTGAGAGGCATCAGAGAATAGGGGAACGAGTGGCAAAGGCTCTTGAAGAAAAGAATATGCGTGACTGGCTTGTGCAGAAGGAGCAAGAGGAtagaaatAGGGTAGCAGAAGCTCTCGATGCTGATATCCTTGGCCCCGATAGTGGTTGGCAACCAATTCCTTTGACAGATATAGTAACCACCACTGCTGTAAAGAAAGCTTATCGTAAAGCTACACTTTTTGTGCATCCTGACAAACTGCAGCAGCGGGGGCAAGTATTCAACAAAAGCACATTTGTGAGAAGGTTTTTGATCTTCTAA 1389 0.4154 MVASNASFQHQERYEETDPVQETNDLHEQHAGETSSFTQVALELNEAVNQMQNIFEAETSEGAATNIGDTDIKDRQNKDQCWEKSENDCNLEMLVEETTPESVKICKDAKEARVALNEEVDENRSNSSSEENLFDNEHNIEESQIPSTSDWKSSPFKEEEVESIHSDLKESNQTSIMMEEKEVDGTSHKEEQEKEHLKKLDEAKEREREREKEKLAVERAIREARERAFADARERAALERAAAEARQKNISDGRERLGKTTSQANEKTPAEKAALEAKLKAERAAVERATAEARARALERALSEKAASDARNKSDKSVAGLGASRDNGMKQNFHSKSFSYGVRDATDVFDGANGDSAQRCKARFERHQRIGERVAKALEEKNMRDWLVQKEQEDRNRVAEALDADILGPDSGWQPIPLTDIVTTTAVKKAYRKATLFVHPDKLQQRGQVFNKSTFVRRFLIF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0130 462 MobiDBLite consensus disorder prediction 11 29 - -
Ssu5g0130 462 PANTHER AUXILIN-LIKE PROTEIN 1 450 - -
Ssu5g0130 462 MobiDBLite consensus disorder prediction 153 167 - -
Ssu5g0130 462 Coils Coil 106 126 - -
Ssu5g0130 462 Coils Coil 272 301 - -
Ssu5g0130 462 MobiDBLite consensus disorder prediction 1 37 - -
Ssu5g0130 462 Gene3D DnaJ domain 349 457 IPR036869 -
Ssu5g0130 462 SUPERFAMILY Chaperone J-domain 362 448 IPR036869 -
Ssu5g0130 462 MobiDBLite consensus disorder prediction 244 276 - -
Ssu5g0130 462 MobiDBLite consensus disorder prediction 302 330 - -
Ssu5g0130 462 Coils Coil 189 223 - -
Ssu5g0130 462 MobiDBLite consensus disorder prediction 244 261 - -
Ssu5g0130 462 MobiDBLite consensus disorder prediction 174 214 - -
Ssu5g0130 462 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 450 - -
Ssu5g0130 462 MobiDBLite consensus disorder prediction 129 152 - -
Ssu5g0130 462 MobiDBLite consensus disorder prediction 117 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0130 Ssu-Chr5 2742592 2744831 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0130 - - gmx:100816942 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0130 5 2742592 2744831 Ssu5g0130 5 2742592 2744831 ECH