Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0030 atgtGGGGAAGGGTGGAAAAATGGCGATGCGTTGGGAATTGGATTCATCGCCCGAGTCCTTGGGTATGGGGATGCACGCAGCAGCGTTTGTTGCACGAGGGCCCAGACACCGTGGAGGAGCTTCTCGATAGGCACCTCGTCAAAAACAAAAACGACGAGTTAGAGAATCGGAGGCAACTCACCAGCACTCAGCGCGAAGCGCTGAGTCTGTACCGGGACATTATTCGGGCCACCCGCTTCTTCATGTGGCCCGATTCCAGGGGCATCCTCTGGCGCGACGTGCTTAGAGAGAACGCCCGAACTGAGTTCGAACAGGCTCGCTTCGAAACCGACCCGGAAATCGTGACCCGATTGCTTATCGGGGGCCGCGAAGCCCTCCACTCCGCTATCGATAAGCTCGCCGAGAAGCACACACAACACATTCAGAAAGATCATCCCTCTGACTCTCACCAACGCTGA 459 0.5643 MWGRVEKWRCVGNWIHRPSPWVWGCTQQRLLHEGPDTVEELLDRHLVKNKNDELENRRQLTSTQREALSLYRDIIRATRFFMWPDSRGILWRDVLRENARTEFEQARFETDPEIVTRLLIGGREALHSAIDKLAEKHTQHIQKDHPSDSHQR 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0030 152 CDD Complex1_LYR_LYRM7 67 127 IPR045298 GO:0034551
Ssu5g0030 152 Pfam Complex 1 protein (LYR family) 65 126 IPR008011 -
Ssu5g0030 152 PANTHER COMPLEX 1 PROTEIN CONTAINING PROTEIN, EXPRESSED 3 149 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0030 - - gmx:100781648 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0030 5 489990 490448 Ssu5g0030 5 489990 490448 ECH