Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0019 ATGGCAGAGGAGAAGCAGCACAAGAGCCACGACTACGACACCACTACTGAGaaaaaggaagaagagaagccTCAGGAAGAGGTGATCGTCACCGACTTTGACAATAAGGTCAAGGTTTCTGCAGAACCCGAGACCAAGCTGCAGGAACCAGAGAAGAAGCACAGCCTCCTAGAGAAGCTCCACCGATCCACCAGCAGCTCCAGCTctTCGAGTGATGAAGAGGAGAAAGGAGAAGgtggagagaagaagaagaagaaaaaggaaaagaaagggcTGAAGGAAAAGATTGAAGAAAAGATAGGAGGTGGTGACCACAAGGAAGAGAATAAGGAGGAGGACACCTCGGTTCCGATTGAGAGAGTGGAGGTTGATGCAGCACACCCCGAGACTGGGGAAAAGAAGGGTTTCCTCGACAAGATTAAGGAGAAGCTGCCAGGTCAGCACAAGAAGACAGAGGAAGTTCCCCCGACATCATCAGAGTATAATGCTCCCCACACCGAGACTCATGAAGGGGAGGCCAAGGACAAGGAGAAGAAGGGCCTTTTAGATAAGATCAAAGAGAAGCTTCCTGGTTATCAccccaagccaaatgaagatgacaaagaaaaggaaattggTACTCCTTGA 627 0.4242 MAEEKQHKSHDYDTTTEKKEEEKPQEEVIVTDFDNKVKVSAEPETKLQEPEKKHSLLEKLHRSTSSSSSSSDEEEKGEGGEKKKKKKEKKGLKEKIEEKIGGGDHKEENKEEDTSVPIERVEVDAAHPETGEKKGFLDKIKEKLPGQHKKTEEVPPTSSEYNAPHTETHEGEAKDKEKKGLLDKIKEKLPGYHPKPNEDDKEKEIGTP 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0019 208 Pfam Dehydrin 42 148 IPR000167 GO:0009415
Ssu5g0019 208 ProSitePatterns Dehydrins signature 2. 184 191 IPR030513 -
Ssu5g0019 208 ProSitePatterns Dehydrins signature 2. 139 146 IPR030513 -
Ssu5g0019 208 MobiDBLite consensus disorder prediction 1 208 - -
Ssu5g0019 208 ProSitePatterns Dehydrins signature 1. 67 87 IPR030513 -
Ssu5g0019 208 PANTHER DEHYDRIN XERO 2-RELATED 1 148 IPR000167 GO:0009415
Ssu5g0019 208 PANTHER DEHYDRIN XERO 2-RELATED 132 193 IPR000167 GO:0009415
Ssu5g0019 208 MobiDBLite consensus disorder prediction 165 208 - -
Ssu5g0019 208 MobiDBLite consensus disorder prediction 68 155 - -
Ssu5g0019 208 MobiDBLite consensus disorder prediction 1 60 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0019 - - aprc:113845851 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0019 5 245217 246107 Ssu5g0019 5 245217 246107 ECH