Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3586 atgaaaatgaatatgatgATGAGTGTATTAAACATCTACGGTGGTTGGGGCATCCTTGCGGCTGTTCTTGTGTTCCTTATATTATTGCTTTGGCAGCGTAACAGATTTTTCTTCGCTTCATCTCCATCTCCATCCACTTCCTGTCTGCCCTCCGATTCTATCAATTCAAACTCGAGAACCTCAAATTTTGTGACAGATGcagatttgaaatttttaatggagATTTTGGATGAGAAGCTCAATGAGAGTGATAAATGGGAGGATGTTCTGGATAAAAGAAACCATCATCTATGCTACAATGTGAAATGCTGCAAGCCAAAGGTTACTGATGTTATTTTCAAACTGGATTGCAGACTTGAATTGATCATGGTTTTTTCTGGGAATAATGGTCCCCTGAGATATTTGAGCAAGACCGTGTTCAATGATATTTCATCTGAGATGGTAAGAAACTTCTACATGGACAATGATTACAGAAAGCAGTGGGATAAAACACTGGTTGAGCATAATCAACTGCTGGTAGACAAATCTGATGGTACTGAAGTTGGTCATACAATTAAAAAGTTCCCTCTTTTAAAGCCTAGAGAATATGTGCTAGCTTGGAAGTTGTGGGAGGGGAATGATAAAACATTTTACTGTTTTATGAAGGAATGTGAGCATCCTTTGGCACCACGACAGAGAAAATATGTACGAGTTGAGTTTTTTAGATCTGGCTGGCGAATAAGAGAAGTACCTGGTTGCAATGCCTGTGAGATCACAATGTTTCATCAAGAAGATGCTGGTTTAAATATGGAGATGGCTAAGCTGGCTTTTCGCAAAGGCATATGGAACTATGTATGCAAGATGGATAATGCACTTAGAAGATACTCTGTTCGAAGCTATCATTTATCAAGTTCAGTTACCACTTCAGTCAATTTAATGCAGAAGGTACCGGCTTGCTTGGACCCTATTCCGAGCAACATATCTCCAGCACATGCTACTGCCTTCCATGATCAAGTTACTGATGAATCTCAAATGCGGATGATCCGAAGAAGGCCATCAAGAAAGTTGCTAGCCAATAGTCTGCTGCTTCTAGGGGGTGCTATATGCCTGTCTCGAGGTCACTCTAGCTTAGGTGCTAAAGTTGCCATGGCATACATCTTAACAAAACTTAGTAAGCGTGGTGCTAGATCAAACCAAAGCAAACAAAGTTGA 1191 0.3929 MKMNMMMSVLNIYGGWGILAAVLVFLILLLWQRNRFFFASSPSPSTSCLPSDSINSNSRTSNFVTDADLKFLMEILDEKLNESDKWEDVLDKRNHHLCYNVKCCKPKVTDVIFKLDCRLELIMVFSGNNGPLRYLSKTVFNDISSEMVRNFYMDNDYRKQWDKTLVEHNQLLVDKSDGTEVGHTIKKFPLLKPREYVLAWKLWEGNDKTFYCFMKECEHPLAPRQRKYVRVEFFRSGWRIREVPGCNACEITMFHQEDAGLNMEMAKLAFRKGIWNYVCKMDNALRRYSVRSYHLSSSVTTSVNLMQKVPACLDPIPSNISPAHATAFHDQVTDESQMRMIRRRPSRKLLANSLLLLGGAICLSRGHSSLGAKVAMAYILTKLSKRGARSNQSKQS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3586 396 SUPERFAMILY Bet v1-like 78 288 - -
Ssu4g3586 396 Pfam START domain 146 258 IPR002913 GO:0008289
Ssu4g3586 396 ProSiteProfiles START domain profile. 57 290 IPR002913 GO:0008289
Ssu4g3586 396 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 19 395 - -
Ssu4g3586 396 PANTHER PHOSPHATIDYLCHOLINE TRANSFER PROTEIN 19 395 - -
Ssu4g3586 396 CDD START_STARD2_7-like 64 288 - -
Ssu4g3586 396 Gene3D - 58 290 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3586 Ssu-Chr4 86984510 87012065 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3586 - - gmx:102661161 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3586 4 86984510 87012065 Ssu4g3586 4 86984510 87012065 ECH