Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3572 ATGGGAATGGACTTGGCTTTCCATTCACCCTTGTATCTGTCTTCCACTACGAGAACGACATGGCCCAATTCCCGGGTTCTCGTTAGGCCTTTCACTTTCAGGAACTTCTCCTTGCCTTCGTCTGCTCTGgcATATGATTCTGAATTGGAGAACAAAAAGCATCAACTTCTGACCTCTGTCCAAGACACGCAAAGGGGCCTCTTAACAACTCCTGATCAACGCTTTTCTATCGAGGAGGCTCTGGTCAATGTGGAAGCCTACAGCATGGGTCAGCCAATCAATTTGACCAACTTGGATGGAACATGGCGCCTCCAGTATACTTCTGCCCCTGATGTTCTCATTCTTCTCCAAGCTGCTGCTACACTTCCTTTCTTTCAAGTTGGACAGATCTTTCAGAAATTTGAATGTCGTGATCAATCTAATGGAGGTGTTATCCGCAATGTTGTCCGATGGAGTATTCCAAATTTGTTAGAGGAACAAGAAGGTGCTACACTAATTGTGTCTGCCAAGTTTACTGTTGTATCTGTCCGTAATATCTACCTTCAGTTTCAAGAGATCACAGTTCAAGATATAAATATTAGTGAAGAGCTGCAGGCTCTAATAGCTCCAGCAATACTACCACGATCTTTTATAAGTCTTCAGATTTTGCAATATCTCCGTGCTTTCAAAGCTCAAATCCCTGTGAGGGATCCAGGAAGggAATCAGTAGGAGGACTATATTACCTTAGTTATTTGGATGATAATATGCTTTTGGGTCGTGCTGTTGGTGGAGGAGGGGTATTTGTGTTTACTAGAGCCCAATCTCTCTACTGA 813 0.4317 MGMDLAFHSPLYLSSTTRTTWPNSRVLVRPFTFRNFSLPSSALAYDSELENKKHQLLTSVQDTQRGLLTTPDQRFSIEEALVNVEAYSMGQPINLTNLDGTWRLQYTSAPDVLILLQAAATLPFFQVGQIFQKFECRDQSNGGVIRNVVRWSIPNLLEEQEGATLIVSAKFTVVSVRNIYLQFQEITVQDINISEELQALIAPAILPRSFISLQILQYLRAFKAQIPVRDPGRESVGGLYYLSYLDDNMLLGRAVGGGGVFVFTRAQSLY 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3572 270 PANTHER PLASTID-LIPID-ASSOCIATED PROTEIN 10, CHLOROPLASTIC-RELATED 41 269 - -
Ssu4g3572 270 Pfam PAP_fibrillin 52 263 IPR006843 -
Ssu4g3572 270 PANTHER - 41 269 IPR039633 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3572 Ssu-Chr4 86786459 86789340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3572 53 268 Acyl Lipid Metabolism Gene Families AT2G35490 28.139 2.08e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3572 - - vra:106773958 441.039