Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3562 ATGTCACGAGAAATGGTGTACGTGCAGCAGTGTATGGGTGTCAATGGGCTCGAGAAAATCATTCTTAGAGAAGTTCGCGGTTTCTCTGCTGAGGTTTATCTATATGGGGGTCAAGTTACATCCTGGAAGAATGAACTTGGGGAAGAATTGCTCTTTGTCAGTAGTAAGGCTAGTTTTAAGCCTCCAAAATCCATACGCGGAGGTATTCCGATATGCTTTCCTCAATTTTCAAATCATGGCTCTCTTGAGCGACATGGATTTGCAAGGAACAGGTTTTGGACCTTAGATCCTAATCCCCCACCATTTCCAACAAATAGCACCAACAGAGCTTTCATTGATTTGATTCTTAAGCACTCTGAAGATGATACAAAAAATTGGCCCCATAGATATGAGTTTCGCCTGAGGATAGCTTTGGGACCTGCAGGGGATCTGATGTTGACATCTCGCATTAGAAATACAAATACAGATGGGAAATCCTTTACCTTCACATTTGCCTATCATACATACTTCTATGTTAGAGACATCAGTGAAGTGCGAATTGAAGGATTGGAGACACTAGATTATCTGGACAACTTGAAGAATAAAGAACGATTTACTGAACAAGGGGATGCTATAACATTTGAGTCtgaaGTGGACAAAGTATACTTAAGCACTCCCACAAAAATTGCTATCATAGACcatgaaaggaaaagaactttTGTATTACGAAAAGATGGGCTTCCTGATGCCGTGGTATGGAACCCATGGGACAAGAAAGCAAAAACCATAGCTGATTTAGGGGATAATGAGTACAAACACATGCTGTGTGTTCAAGCTGCTTGTGTAGAAAAACCAATTACTCTTAAACCTGGTGAAGAGTGGAAAGGAAGACAAGAAATATCTGCAGTTCCTTCAAGTTATTGTAGTGGTCAACTTGATCCACGAAAAGTACTTATTAGTTATTAG 945 0.3947 MSREMVYVQQCMGVNGLEKIILREVRGFSAEVYLYGGQVTSWKNELGEELLFVSSKASFKPPKSIRGGIPICFPQFSNHGSLERHGFARNRFWTLDPNPPPFPTNSTNRAFIDLILKHSEDDTKNWPHRYEFRLRIALGPAGDLMLTSRIRNTNTDGKSFTFTFAYHTYFYVRDISEVRIEGLETLDYLDNLKNKERFTEQGDAITFESEVDKVYLSTPTKIAIIDHERKRTFVLRKDGLPDAVVWNPWDKKAKTIADLGDNEYKHMLCVQAACVEKPITLKPGEEWKGRQEISAVPSSYCSGQLDPRKVLISY 314
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3562 314 CDD D-hex-6-P-epi_like 27 294 IPR025532 -
Ssu4g3562 314 Pfam Aldose 1-epimerase 20 293 IPR008183 GO:0005975|GO:0016853
Ssu4g3562 314 Gene3D - 15 300 IPR014718 GO:0030246
Ssu4g3562 314 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 5 309 - -
Ssu4g3562 314 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 5 309 - -
Ssu4g3562 314 PIRSF PHexose_mutarotase 7 301 IPR025532 -
Ssu4g3562 314 SUPERFAMILY Galactose mutarotase-like 14 293 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu4g3562 Ssu-Chr4 86650425 86654697 Dispersed/Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3562 K01792 - gmx:100784457 600.512