Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3521 ATGGCTGCTGCAACTGCTGGAGTTGTTGGTGGAAATGGTTCATCTGCTTCTTGGATGCAATTCAAAGGCAGGGAAAAGAAGCAGACCAAGATGAACAAGTCTAGAATTTGTTGCTCTTATTCTTCTTCTGTTGTGGATCCTTATAAAACCTTAAGAATACAACCAGGTGCCTCTGAATCTGAGGTTAGGAAGGCTTTCAGACAGCTTGCTTTGCAGTACCATCCAGACGTGTGCAGAGGGAACAATTGCGGGGTGCAGTTTCACGAAATCAACGAGGCTTATGATATTGTGATGGCCAACTTGAGAGGAGAATCAAATGAGACACAAACGTATGAGGCATATTATGATGCTGGCATTGATGAGCCTCTGAGAGGAATGAACGATCCAGATTGGGACTTGTGGGAGGAGTGGATGGGTTGGGAAGGAGCAGGAATTCGTGACTACTCGTCCCATATTAATCCTTACATTTGA 471 0.448 MAAATAGVVGGNGSSASWMQFKGREKKQTKMNKSRICCSYSSSVVDPYKTLRIQPGASESEVRKAFRQLALQYHPDVCRGNNCGVQFHEINEAYDIVMANLRGESNETQTYEAYYDAGIDEPLRGMNDPDWDLWEEWMGWEGAGIRDYSSHINPYI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3521 156 PRINTS DnaJ domain signature 48 66 IPR001623 -
Ssu4g3521 156 PRINTS DnaJ domain signature 82 102 IPR001623 -
Ssu4g3521 156 PRINTS DnaJ domain signature 66 81 IPR001623 -
Ssu4g3521 156 PANTHER CO-CHAPERONE PROTEIN DJLA 5 156 - -
Ssu4g3521 156 CDD DnaJ 46 96 IPR001623 -
Ssu4g3521 156 PANTHER HEAT SHOCK PROTEIN BINDING PROTEIN 5 156 - -
Ssu4g3521 156 SMART dnaj_3 45 102 IPR001623 -
Ssu4g3521 156 Gene3D DnaJ domain 18 105 IPR036869 -
Ssu4g3521 156 SUPERFAMILY Chaperone J-domain 42 144 IPR036869 -
Ssu4g3521 156 ProSiteProfiles dnaJ domain profile. 46 115 IPR001623 -
Ssu4g3521 156 Pfam DnaJ domain 46 98 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3521 Ssu-Chr4 86202208 86203228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3521 - - gmx:100780336 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3521 4 86202208 86203228 Ssu4g3521 4 86202208 86203228 ECH