Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3518 ATGCAAGGGTGTGTGCAAGCGATGGTTAGGACTGATTTTAAGTCCTTCTTTTCCAACATAATTTGTGTCTCGCTAGCACTCATTCTTCAAGGCCTACTCGACCTTCCTTTCATGCTCGCTTTCCTGCCTCCAAATTTGGACTTGGATGCCCAAACCCGCAAGGCTCCCTTATCTCCGGACATGCTCATAAAGGGAAACGTGTGTGGCTATTCTAatggtttgtttttgttttgtagtaACAGATACACATCGGGTCGGGGCTACTATGTGTATGATCCACTCACCAAGGAATGCACCCAGATACCTCCTTTTCCTGAAGCGGACCAGGAAGAGCGTTTATACGCTGTTGGCTTACTTTCCGAAACTTTGAATTCTACTCGCTGCTTCTGCGTGATGGTCATGAATTCCTTTATAAGAAGGACGTATAAGTTTAAACTGGAGGTTTTCTCCTCAGACAAAGGGATGTGGAGACAAATATTTGTGAGATGCGTAAATGGCTTTGCCTTTGCTCCTCACTGGATGCTCAGCTTGGCGTATCAAGGAAACCTGTATTTCATGGGCAGGCCAAGTATTTTTGTGATTGATCGTGTTTTTCTGGATTATTATCCCATTGATTATCCTGAAGGTGCTGATGCTATGAATATAATGAGCTCTGGATACCTTGGGTGCTCTGGTGGACTTTGA 684 0.4342 MQGCVQAMVRTDFKSFFSNIICVSLALILQGLLDLPFMLAFLPPNLDLDAQTRKAPLSPDMLIKGNVCGYSNGLFLFCSNRYTSGRGYYVYDPLTKECTQIPPFPEADQEERLYAVGLLSETLNSTRCFCVMVMNSFIRRTYKFKLEVFSSDKGMWRQIFVRCVNGFAFAPHWMLSLAYQGNLYFMGRPSIFVIDRVFLDYYPIDYPEGADAMNIMSSGYLGCSGGL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3518 227 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 56 225 - -
Ssu4g3518 227 PANTHER OS08G0529300 PROTEIN 56 225 - -
Ssu4g3518 227 SUPERFAMILY Galactose oxidase, central domain 66 188 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3518 Ssu-Chr4 86173861 86174544 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3518 - - ccaj:109807229 258.455