Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3514 ATGCGAGACCCAAAAGGCATCTGTGATTCTTGCAAAAGTGATCCTTGCAAAACCAGATATCTCACTGCAAGTACTCAAGCGACCGCAATGGGTATAATCAGGAGTTGCTTCTCCTTCATTGCAGGGACGGTCTTTGGGGTTTACATGGCTCAGAGTTATCAAGTTCCTGACGTCAAGAAGGAAGCTGACACTGCCTTGTTACAGGCAAAGCAAGTGGAGGAAAAATATCGCAAGTCCAAGTAA 243 0.4568 MRDPKGICDSCKSDPCKTRYLTASTQATAMGIIRSCFSFIAGTVFGVYMAQSYQVPDVKKEADTALLQAKQVEEKYRKSK 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3514 80 Pfam Domain of unknown function (DUF4535) 35 78 IPR027854 -
Ssu4g3514 80 PANTHER TRANSMEMBRANE PROTEIN 30 80 - -
Ssu4g3514 80 PANTHER OS07G0239500 PROTEIN 30 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3514 Ssu-Chr4 86139418 86140482 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3514 - - ccaj:109807774 98.5969