Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3510 ATGGTGATGGCCATGGCCGTGGCCATTTCATCTCCCTCTTACAACCTCACCTTCCTTGGTCCTCGCTCAATTCAACCTGTTTCTTTCACTCCGTCATCTTCTTCTTATGTTTTCACTCAACCTCTCCGAAAGCTGCCACTCAGAGTCGCTACAAAGGTCCAGAGCGTTGGAGTTGGAAGAGAAGGTGCAGATCCCAAGGCCGGTGTCTCCGTTTACAAACCTAAATCCTACGAAGTTCTCGTCACCGATGCTTCCAGTTCCCTCTCTTATGCTCTTCAAGACGGAAAACTTCGCCTCGAAATCGATTTCCCGCCTTTGCCCAGCAACATATCTTCTTATAAGTTACTTGACCTTTGTGTGACATGCTTATCTGAATACATTGCACATAATTTCTCAATTCCTAAATATTTCAAGGGATCTTCAGATGAGTTCATTGATGCCAACATTCACTTGCCTTGGCTGTTATCTGTCAGGAATACCCTTGATTTTGACTTGAAGATGACAATGAAGATCGTTGGCAGTCTAGTGAACCTCCATCACTCTACATATTCAGTAACTGCAGTACACGTGAACTTGCATAATAGAGAAGAAAAATTTGCTACATCAACACcaacacttttatttaatcttgAACTAGACACACTGCGGTATATGTTGCCTTCGGGCTTCCCAACCAAAGATTTGCACTACCGCTTTCTTTCTCAATTCACTCCGGTGTTCTACATCCGAATCAGAGAATATTCAAAGACAGTTGCAATAGCACCTTATATTGTCAATTACAGTGGAGCTGTGTTCCGCCAGTACCCAGGTCCTTGGCAGGTGATGCTTAAACAAGCAGATGGTTCTTACGCTTGCATAGCAGAAAGTGCAGCCCGCTTCACCCTTGGTGAGGCCAAAGAGGAATTGTTGAGGGTCTTGGGACTTAAAGAAGAAGAGGGAAGTTCGCTACAATTTCTTCGAAGAGGCTACAAGGCAAGCACGTGGTGGGAAGAAGATTTTGATTCAGAAGTATCTTCTGCATGGCGGAGTTGA 1032 0.439 MVMAMAVAISSPSYNLTFLGPRSIQPVSFTPSSSSYVFTQPLRKLPLRVATKVQSVGVGREGADPKAGVSVYKPKSYEVLVTDASSSLSYALQDGKLRLEIDFPPLPSNISSYKLLDLCVTCLSEYIAHNFSIPKYFKGSSDEFIDANIHLPWLLSVRNTLDFDLKMTMKIVGSLVNLHHSTYSVTAVHVNLHNREEKFATSTPTLLFNLELDTLRYMLPSGFPTKDLHYRFLSQFTPVFYIRIREYSKTVAIAPYIVNYSGAVFRQYPGPWQVMLKQADGSYACIAESAARFTLGEAKEELLRVLGLKEEEGSSLQFLRRGYKASTWWEEDFDSEVSSAWRS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3510 343 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 190 343 IPR044687 -
Ssu4g3510 343 Pfam Domain of unknown function (DUF1995) 200 299 IPR018962 -
Ssu4g3510 343 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 24 151 - -
Ssu4g3510 343 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 190 343 - -
Ssu4g3510 343 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 24 151 IPR044687 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3510 Ssu-Chr4 86105047 86109588 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3510 - - gmx:100803725 421.394