Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3504 atggCTGTGGCTATGGCTGTTTGGAGTGTTGGTCTTCACTTCAGTGCTGCTCATAATAGCTTCAGGGCTTTGGAGAAAACCACTTGCAGTGCCGCTTTCTTGAAGGCCTCATCTGGGTTTCCTGCTACTAAGCCATTTTGCATCCTTAATAGAAAAAGATTTTCATCTTCTGGAACTACAATTATCCCTCGAGCAGCACCTGTTACTGATGTGGAGGATGGAAATCAAGGCGAGACTGATACCATTCCAACTCCTGTAGTTATAATTGATCAAGACTCTGATCCAGATGCAACCGTGGTGGAGATAACTTTTGGTGATCGGCTTGGGGCACTTCTTGACACAATGAATGCATTAAAAAACTTAGGTCTCAATGTTGTTAAGGCAAATGTCTTTCTGGATTCATCTGGCAAGCACAACAAGTTTTCCATCACAAAAGCTGATACTGGCAGAAAAGTGGAAGAGCCAGAGTTGTTAGAGGCAATTCGTTTgacaattataaataatctgATTCAGTACCATCCGGAATCTAGTTCCCGGTTGGCAATGGGAGCAGCTTTTGGACTTCTGCCTCCAAAAGAGCAGGTTGATGTAGACATAGCAACCCACATAACCATTTCTGATGATGGCCCAGATCGAAGTTTGCTGTATGTGGAGGCAGCTGATCGGCCTGGATTACTGGTTGATCTTGTAAAGATTATTACTGACATTGACATTGCTGTTGAATCCGGAGAATTTGACACTGAGGGGCTCTTGGCTAAGGCAAAGTTTCATGTCAGCTACAAGGGTAAAGCAATCATCAAGCCTCTCCAGCAGGTTCTTGGTAATAGCTTGAGATATTTCTTGAGGCGTCCGACAACTgaggaatccagtttttga 876 0.4224 MAVAMAVWSVGLHFSAAHNSFRALEKTTCSAAFLKASSGFPATKPFCILNRKRFSSSGTTIIPRAAPVTDVEDGNQGETDTIPTPVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEEPELLEAIRLTIINNLIQYHPESSSRLAMGAAFGLLPPKEQVDVDIATHITISDDGPDRSLLYVEAADRPGLLVDLVKIITDIDIAVESGEFDTEGLLAKAKFHVSYKGKAIIKPLQQVLGNSLRYFLRRPTTEESSF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3504 291 SUPERFAMILY ACT-like 211 274 IPR045865 -
Ssu4g3504 291 PANTHER FROM 2D-PAGE OF LEAF PROTEIN, PUTATIVE-RELATED 43 291 - -
Ssu4g3504 291 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 43 291 IPR040217 -
Ssu4g3504 291 ProSiteProfiles ACT domain profile. 99 179 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3504 Ssu-Chr4 86070690 86074733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3504 - - gmx:100797324 521.546