Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3502 ATGGGGATTGCGGCGGCTGTTGGAGTGGTGTCACCTTTTCCGTTCTATTACTGTCTCTGGAATTGGCCGCAGTCATGGGTGGAGTTGTGCGGCCGAGGCCGAGACCCATCTAAGGTTATGGCTTACGTTGCCTATTTCTTGAAGCTGCTTCAGCTCATTTCCCTCTTCTCTGTCTCTTCATTCCATTGGCCTCCTCCATTCTACTTCTGGCCCCTTTTTGCCTTTGGCCAATTCTTAAACTTCAgGGTTTATCAGCTACTCGGTGAGGCTGGCACATACTATGGTGTACGCTTTGGAAAAACTATTCCCTGGGTAATTGAATTCCCTTTTGGTGTCATCAAAGATCCTCAGTACGTTGGCAGCATTATGAGTCTTCTTGCATGCCTCTCATGGGTTCCTTTTCAATACACTCTCCTGTGGGTTTTAGGATATGTGTTTATGATGCATGTGGAATCAAAGGAAGATCCATCTACGCGTGCCAAGCCACTCCATTGA 495 0.4727 MGIAAAVGVVSPFPFYYCLWNWPQSWVELCGRGRDPSKVMAYVAYFLKLLQLISLFSVSSFHWPPPFYFWPLFAFGQFLNFRVYQLLGEAGTYYGVRFGKTIPWVIEFPFGVIKDPQYVGSIMSLLACLSWVPFQYTLLWVLGYVFMMHVESKEDPSTRAKPLH 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3502 164 Pfam Phospholipid methyltransferase 71 156 IPR007318 -
Ssu4g3502 164 PANTHER PHOSPHATIDYLETHANOLAMINE N-METHYLTRANSFERASE 5 162 - -
Ssu4g3502 164 Hamap Phosphatidyl-N-methylethanolamine N-methyltransferase [PEMT]. 1 164 IPR024960 GO:0006656|GO:0008757
Ssu4g3502 164 PANTHER PHOSPHATIDYLETHANOLAMINE N-METHYLTRANSFERASE 5 162 IPR024960 GO:0006656|GO:0008757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3502 Ssu-Chr4 86038445 86040085 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3502 K00550 - gmx:100301902 323.553