Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3501 ATGTCATCCTATGCCGCCGTTTTTGTAATTTGGTTAACCTCAAAACGACAATCATTAGTGTCGTCGTTTGAGGGCAGCCAGCACCAGCAGAAGAAGATTGatgataaaacaataaaaagggaGTGGAATAGTGGATGGGACCCACTTATCCGACGCTTTTCCACACATTCAAGCCAGCTCCAAGTTCTAATCTACGAACAAACGTGCAATATACAACCAAGGGAAAACAGAACTTTGAAAAGCTCAATGGCTGCAACTTATTATATAGTGCCAAGTCCGAAAACTTTCTCACCTCTCTTCAGAAACCCACCTTCCATTCCTTTCAGTCACGTTTCACTGTTGGGTTCATTGGACTATCCGTTCCATTGTTCCACTTCCAGAAGAGGAAACGTTGAGGCCAATGCGAAGAAGAAGAACCCTTGGCTGGACCCTTTTGATGATGGGGAGGACCCTGAGATGGAGTATGGTTCCTTGTTTGCAGATGGTAAGCAGGAGGAGGATCCTAGGCCACCGGATGACCCTGACAACCCTTATGGCTTCTTGAAATTCCCTTCTGGATATGCAGTGGAGATAGCCTCCTTGGCATTGAAAGTGAGAGGGGATGTGAGGAGATGCTGCTGTGTGATCTCTGGTGGTGTTTATGAGAACCTCTTGTTCTTTCCAGCTATCCAGCTGATCAAGGATAGGTACCCTGGTGTTCAGATTGATGTGGTGGCGTCCGAGAGGGGCAAACAGACCTACGAGTTGAATAAGAATGTGAGGTGGGCAAATGCCTATGACCCTGACGATGAATTTCCAGAGCCTGCTGAGTATACTGATATGGTTGGAGTTCTAAAGAATAGGTACTATGACATGGTCTTAAGCACCAAATTGGCAGGCCTTGGCCATGCAGCATTTTTGTTTATGACAACTGCCCGAGATAGAGTTAGCTATGTCTACCCAAATGTGAATGCTGCAGGAGCTGGATTACTTCTATCTGAAACATTCGTACCCGATAGTTTAAATCTCTCAGATGGAGGATTTAATATGTATCATCAGATGGTTGACTGGCTGGGAAGACCATTTCGAGACGTTCCAAAACAACCAGTGCCACCACTTAGGGTATCAATCTCAAGGAAGCTGAAGGAGGTTGTAGAGGCAAAATACGAAAAAGCAGgtgcaaaaaaaggaaaatatgttGTAATTCACGGGATAAAATCAGATTCAAAGGCCTCCATGCAGTCCAGGGGTGATCCTGATAGCTTGCTACCCATTGAAGTGTGGGCGGAAATTGCTGACGCTATAAGGGAAGTTACGCCACTTTTTGTCATCCCAcatgaaaaagaaagggaaaatgtGGAGGAAATCTTTGGAGAAGATGCCTCTATAGTCTTCATCACCACCCCTGGACAGATGGCTGCTCTTATTAATGACTCAGCTGGAGTAATAGCTACAAATACAGCTGCCGTTCAGCTTGCAAATGCACGCGAGAAACCTTGTGTTGCACTATTTTGCTCTGAAGAGAAGGGAAACAAGTTTGTTCCGCAGGCTGAAGAGAAGAAATGCATTATAATATCATCCAAGACAGGAAAGTTGATAGACATTGATGTTGAGGCCGTAAAAAATGCAGTTCAAACATTCAATTTGTCTCCGGCTTTAGTATAG 1644 0.4337 MSSYAAVFVIWLTSKRQSLVSSFEGSQHQQKKIDDKTIKREWNSGWDPLIRRFSTHSSQLQVLIYEQTCNIQPRENRTLKSSMAATYYIVPSPKTFSPLFRNPPSIPFSHVSLLGSLDYPFHCSTSRRGNVEANAKKKNPWLDPFDDGEDPEMEYGSLFADGKQEEDPRPPDDPDNPYGFLKFPSGYAVEIASLALKVRGDVRRCCCVISGGVYENLLFFPAIQLIKDRYPGVQIDVVASERGKQTYELNKNVRWANAYDPDDEFPEPAEYTDMVGVLKNRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYVYPNVNAAGAGLLLSETFVPDSLNLSDGGFNMYHQMVDWLGRPFRDVPKQPVPPLRVSISRKLKEVVEAKYEKAGAKKGKYVVIHGIKSDSKASMQSRGDPDSLLPIEVWAEIADAIREVTPLFVIPHEKERENVEEIFGEDASIVFITTPGQMAALINDSAGVIATNTAAVQLANAREKPCVALFCSEEKGNKFVPQAEEKKCIIISSKTGKLIDIDVEAVKNAVQTFNLSPALV 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3501 547 Gene3D Glycogen Phosphorylase B; 377 542 - -
Ssu4g3501 547 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC 92 547 IPR044983 GO:0009507|GO:0009773|GO:0010598
Ssu4g3501 547 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 216 539 - -
Ssu4g3501 547 Gene3D Glycogen Phosphorylase B; 200 344 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3501 - - gmx:100803710 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3501 4 86034462 86037904 Ssu4g3501 4 86034462 86037904 ECH