Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3486 ATGGCACGCCTTGATTCGTTccctaaccctaaccctaacACACCAACTTCATCTTCAACAGCAACAACCATGCATATCTCGCCACCTATTCCGGAGAAGTTACATATCGAACATGCGCAAATCAGCTTTCGAGGGAAACATTTTGAGACTCCTCCGCTCCGAGATTCACCTGTTACAAAGTTTAATTCCTTTATGGTGGACGGCCGAGCTGGGGAGAGATGGATTACGTTGAAAAGACAACATGCTGATGAACATATTAAACTTGAAGTCACCATGTTCGATGGAGCCGTTCCTGTTCCAACTCCAAATGGTGATGTGGCTAATTCAGATGAAATGCAGATGCACATTACTGTAATTGTCACCATCTCCAAGGGAGAAGATGGTGGTGTGTTGGAAATCATGTGCTCTGCTTGGCCTGACAGTATAGAGATAAAAAGGCTGTTCATACGTGCAAATGAGAAGATGCTAGCTGATCCCTATGCTGGTCCTGAATTCACGGAATTGGATGATGAGTTGCAAGACAGACTTTATGATTTCTTGGAAGTAAGGGGTATAAATGATGATCTTGCTGTTTTCTTGCATCAGTACATGAAACACAAGGATAAAGCGGAGTTCATAAGATGGATGGAAAGGGTTAAGTCTTTTATTGAAAGGAAATAA 660 0.4106 MARLDSFPNPNPNTPTSSSTATTMHISPPIPEKLHIEHAQISFRGKHFETPPLRDSPVTKFNSFMVDGRAGERWITLKRQHADEHIKLEVTMFDGAVPVPTPNGDVANSDEMQMHITVIVTISKGEDGGVLEIMCSAWPDSIEIKRLFIRANEKMLADPYAGPEFTELDDELQDRLYDFLEVRGINDDLAVFLHQYMKHKDKAEFIRWMERVKSFIERK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3486 219 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 56 217 IPR036561 -
Ssu4g3486 219 MobiDBLite consensus disorder prediction 7 26 - -
Ssu4g3486 219 MobiDBLite consensus disorder prediction 1 27 - -
Ssu4g3486 219 Gene3D Mitochondrial glycoprotein 40 216 IPR036561 -
Ssu4g3486 219 PANTHER COMPLEMENT COMPONENT 1 18 217 IPR003428 GO:0005759
Ssu4g3486 219 PANTHER MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN 18 217 - -
Ssu4g3486 219 Pfam Mitochondrial glycoprotein 59 216 IPR003428 GO:0005759
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3486 Ssu-Chr4 85774933 85775993 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3486 - K15414 gmx:100797340 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3486 4 85774933 85775993 Ssu4g3486 4 85774933 85775993 ECH