Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3466 atgaCTTCTCTAGGATCCACCATGTCAAATGGCCATTCTAAATCGACCTTTGATGAGCTCCGATGGGTGATTAACATCCGCAAAACCCTTGAAGAAGAGCTTGAGGAAGATGGTGAATTTGCTGTATCCATCTTCAGCGTGCCCAAGCTCCTCATGGCAAGTGATCCAGACTCTTATGTCCCTCAACAGGTTGCGATAGGCCCTTACCATTATTGGCGTCCCGAGCTATATGAGATGCAGAGGTACAAGATTGCAGCAGCAAAAAGATTCCAGAAACATCTACAATGCCTCAAGTTAGAGAATCTAGTTGACCAATTGACCAAGTTGGAGGAAAGGGTGCGAGCATGCTACCACAAGTTCTTGGATTTCAATGGGGAAACATTGGTGTGGATGATGACGGTTGATGCCTCATTCTTGCTTGAGTTCCTTCAAGTTTATGCCATGCAAGAAGGAGCAAAGGTGCCTGGGGTTTCCTCCAGCATGTCTCATTTGGTGGACTATGCTGGGAAGAAATCAGCTCATAACGCAATTTTGAGGGATATTGTAATGCTTGAGAATCAAATCCCATTATTTGTGTTGAGAAAGATGCTGGAGTTCAAATTCTCGTCACTAGAAGCTGCTGATGACATGCTGATGTTGATGTTTATAGGGCTGTTCAAAGAGATTTCTCCTTTCAAGATGATAGAGGAGTATCCAAACATTCAAGTCTCAGAGAGTGTGCATTTGCTAGATTTCTTGTATGATGTGATAGTACCCAAATTAGACCAACAGCTAGACACAATTGAAGTTGAGTTtcagcaagaagaagaaaaggaagcaAATGAAAAAGCAACCTCAGACCCTAGCCAGGTTAAGCAATTCTTCAGTGAAGTATGGAAGCtgctttcaaaattaaacaaagggCCAGTGAAGTTAATCAAAAAGGTAATTGTATCTAAGCCTCTCAAAGTCTTTCTTAAGTTGCCTTGGAAAATCGTGTTCAACCTTCCAGTACTTAAGCTTCTGAAGCAACCTGTTgaatatttctttctctctcaagaAAAAGGAGATGAAAAGCCAGAAGGTGGGAGTTCAAGCTCGAATAGTATCATGAACAAGCCACCCTCGGTGGAGGAAATCACTATTCCTTCCGTTACAGAACTCTTGAATTCTGGGGTTCGTTTCGTACCCACCAAGGGAACCATATCAAACATCAATTTTGACACTAAGACATGCACGTTTTACCTTCCCATAATTGGTTTGGACGCTAATAGTGAAGTTTTCCTGAGAAATTTGGTTGCATATGAAGCATCAGTTGCATCGGGGCCATTGGTTATAACTCGTTACACTGAGTTGATGAACGGGATTATAGACTCGGAGGAGGATGCAAAGATTCTCAGAGAAAAAGGGATTATTCTGAACCACTTGAAGAGTGATAAAGAGGTGGCTAACCTGTGGAATGGGATGAGCAGGTCCTTGAGATTGTCAAGGGTGCCATTATTGGATAAGGTCATTGAAGATGTTAACAAGTATCACAATGGTAGAATGAAGgtcaaaatttggaaattcaTGAAGGTATATGTTTTCAGTTCTTGGCAATTTTTGACATTCTTAGCTGCCATCTGCCTCTTGCTCTTGATGGCTTTGCAAGCTTTCTGCTCTGTCTACGCTTGTAGTCGCTTTTTTCGCTCTGCACTAGATACCAAGTGA 1689 0.4014 MTSLGSTMSNGHSKSTFDELRWVINIRKTLEEELEEDGEFAVSIFSVPKLLMASDPDSYVPQQVAIGPYHYWRPELYEMQRYKIAAAKRFQKHLQCLKLENLVDQLTKLEERVRACYHKFLDFNGETLVWMMTVDASFLLEFLQVYAMQEGAKVPGVSSSMSHLVDYAGKKSAHNAILRDIVMLENQIPLFVLRKMLEFKFSSLEAADDMLMLMFIGLFKEISPFKMIEEYPNIQVSESVHLLDFLYDVIVPKLDQQLDTIEVEFQQEEEKEANEKATSDPSQVKQFFSEVWKLLSKLNKGPVKLIKKVIVSKPLKVFLKLPWKIVFNLPVLKLLKQPVEYFFLSQEKGDEKPEGGSSSSNSIMNKPPSVEEITIPSVTELLNSGVRFVPTKGTISNINFDTKTCTFYLPIIGLDANSEVFLRNLVAYEASVASGPLVITRYTELMNGIIDSEEDAKILREKGIILNHLKSDKEVANLWNGMSRSLRLSRVPLLDKVIEDVNKYHNGRMKVKIWKFMKVYVFSSWQFLTFLAAICLLLLMALQAFCSVYACSRFFRSALDTK 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3466 562 Coils Coil 251 271 - -
Ssu4g3466 562 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 11 552 IPR004158 -
Ssu4g3466 562 PANTHER UPF0481 PLANT-LIKE PROTEIN 11 552 - -
Ssu4g3466 562 Coils Coil 99 119 - -
Ssu4g3466 562 Pfam Plant protein of unknown function 44 539 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3466 Ssu-Chr4 85434335 85436023 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3466 - - gmx:100779984 920.998