Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3464 ATGATCCGTCTCAACCTCAGCCTCATTCCATCTATTCtcctttcaatttttgttgtCATTTCATGGACCTTGTTTTCTCCCTGCCATGCAGACAATTCCCGGTTCCTAGcagGATTCCCAGCTCAGGGATCACAAAGTAATGCAAATAACTCAACATTACCATTGGCAGCAGAAAGAACGCGCAGGATTGACCCTAGTAATGATTTCAAGTACTATGAGGCTGGATGGGATATTACCAATACACATTATTTTCTGTCTGTTGTTTTTTCTGGTATTTCTCCGGTTGTCATTGGTGCCCTCTGGTTTTTCATTGTGGCAATATGCTTCATCACCGTAGCTTGCTTGcgttgctgctgctgctgctgccgCCGCAAGAAAAAGTCTAGGACAGATTACTCTCGAACGATTTATGCAATATCACTCATCTTTCTCTCACTCTTCTTGATCATGACAATAATTGGAGGGGTTTTCCTTTACACTGGACTGGGGAAATTCCAAACCACTGCAAGCGATGTATCAGATATTCTGGTCACAAGAGCAAATACAATAGTTGATATTATTCATAATGTAATGGTCAATCTTCAAGCGACTAAGAACATACAAGTAGCCAGTTTTTATCTTCCAGACGATATCAAGCTAGGCATTGAAAAGGCTGAAAGTTTTTCCAGTCAAACTGATTATATTAAGAGGCAAGCAGAGGAAACAGCACGAATCTCAACCAAAGTCCTGAATGCTGTAAGTTACAATCTTATCTTTGTTGGCGGTATGATGCTTATCTTGGCAGTGGTTGGCTTCGGTAAGTATATAAACTTGCTTTTTATCGGGTGGATCCTTGTCACGAGCACCTTTATATTGAGCGGTGTAACTTTAATTGTTCACAATGGGGTAGCTGACACATGCGTTGCAATGGAGGAGTGGGTTCAGCACCCCCGAGATCATTCAGCTCTAAGCAAACTTCTTCCTTGCATGGATGAGACCGCAGCCCAAAAAACCTTGGACATAACCAGAAACACCTCATTCCAAGTGGTCAACATGGTTAATGAATTTCTAATTAATGTAGCCAATAACGCCGATGTGCCACCTTTACCGGATAGGGATATATACTACAATCAATCTGGTCCAACCGTGCCCCCCCTGTGCAATCCATATTTTCCTAACTTGACTGAACGGGCATGTGGTCCATCGGAAGTAGACTTAAAGGGTGCACCTACAGCGTATCGAAGTTTTTTATGTAATACATCCCCATCTGGTCTCTGCATTACCATGGGGAGATTGACTCCTACCCTATACACAAAGGTTATGGTGGCTACCAACATGAGTGTCACACTGCATCGACATGGTCCAATCCTGGCTCGATTAGTAGATTGTTCCTTTGTTGTAGAAACCTTTGATCAAATCAGTAAGACAGATTGTCCGCCGTTTAGGCGATACAGCAATCAGATCTTCATTGGCTTAGTGTTGGTTTCAGCTGCAGTTATGTTTTCTGTGATTTTGTGGCTAGTTTTTGTTAGAGAGAGGCGGCTTCAAATATCTTCAAAGAAGTTGAAGAGAACACAAGTTAACACAAGTTGA 1572 0.409 MIRLNLSLIPSILLSIFVVISWTLFSPCHADNSRFLAGFPAQGSQSNANNSTLPLAAERTRRIDPSNDFKYYEAGWDITNTHYFLSVVFSGISPVVIGALWFFIVAICFITVACLRCCCCCCRRKKKSRTDYSRTIYAISLIFLSLFLIMTIIGGVFLYTGLGKFQTTASDVSDILVTRANTIVDIIHNVMVNLQATKNIQVASFYLPDDIKLGIEKAESFSSQTDYIKRQAEETARISTKVLNAVSYNLIFVGGMMLILAVVGFGKYINLLFIGWILVTSTFILSGVTLIVHNGVADTCVAMEEWVQHPRDHSALSKLLPCMDETAAQKTLDITRNTSFQVVNMVNEFLINVANNADVPPLPDRDIYYNQSGPTVPPLCNPYFPNLTERACGPSEVDLKGAPTAYRSFLCNTSPSGLCITMGRLTPTLYTKVMVATNMSVTLHRHGPILARLVDCSFVVETFDQISKTDCPPFRRYSNQIFIGLVLVSAAVMFSVILWLVFVRERRLQISSKKLKRTQVNTS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3464 523 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 27 509 IPR040283 -
Ssu4g3464 523 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 27 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3464 Ssu-Chr4 85404332 85408340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3464 - - gmx:106799643 760.37