Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3456 ATGTCGAAAGAGGACGTGTTCGTTGGCGCCATCGACCAAGGGACGAGCAGCAGCCGGTTCATAATCTACGACGCCTGTGCTCGGCCAATCGGATGTCACCACGTGGAGTTCACTCAGTTCTACCCGCAAGCAGGGTGGGTGGAGCACGATCCGATGGAGATCTTGGAGAGCGTGAAGGTGTGTGTGGCCAAGGCCGTCGACAAGGCTACCGCTGATGGCTTCAACGTCGACAAGGGATTGAAGGCCATTGGTCTCACCAATCAGAGGGAGACCACTCTCCTTTGGAGCAAATCCACCGGTGTTCCTCTTTACAACGCCATCGTTTGGATGGATGCTCGCACTTCTTCCGTTTGCAGGAGACTGGAAAAGGAGTTATCCGGCGGTAAAAGCCATTTTGTGGAGAGTTGTGGCTTGCCTATTAGCACATACTTTAGTGCTGTGAAGCTGCTGTGGTTGATGGAAAATGTGGATGCTGTGAAGGAGGCTATAAAGAAAAAGGATGTGCTGTTTGGAACTATAGACACTTGGTTGATATGGAATCTAACCGGTGGGGTGAAGGGGGGATTGCATGTTACTGATGTTTCAAATGCATCCCGGACAATGCTCATGAATCTAAAAACCCTTGACTGGGATGCATCTATCCTAGAAACCCTTAAAATTCCTGCTGAAATTTTGCCTAAAATTGTTAGTAATGCTGAAATAATAGGAGAGATTGGCCTTGGATGGCCAATTGCTGGTGTCCCTATTGCTGGATGCTTAGGGGATCAACATGCTGCAATGTTAGGACAAGCATGCCGTAAAGGGGAGGCTAAAAGCACTTATGGCACAGGTGCTTTCATACTACTAAATACTGGTGAAGGAATCATTCAATCAAAGCATGGTCTTTTATCCACTATAGCCTTCAAGCTTGGCCCACAAGCTCCAACCAATTATGCATTGGAAGGATCAGTTGCTATTGCTGGAGCTGCAGTACAGTGGCTTAGAGACGGTCTTGGGATTATTTCTAGTGCTCCAGAAATAGAGGATCTGGCATTGCAGGTTGAGTCCACTGGTGGGGTTTACTTTGTTCCTGCTTTTAATGGATTGTTTGCTCCATGGTGGCGTGATGATGCTCGTGGTGTTTGCATTGGAATAACAAGGTTTACAACCAAGGCTCACATTGCTCGAGCCGTGCTTGAGAGCATGTGTTTCCAAGTGAAAGATGTATTGGATTCAATGCATAAAGATTCAGGAGCAGGTGAATCCAAAGCAAAGTTTTTGCTTAGAGTGGATGGTGGGGCAACTGTCAACAACCTGTTGATGCAGACTCAGGCAGATTTGATGGGAACTCCAGTATTTAGACCTGCTGACATAGAGACAACAGCACTTGGAGCAGCCTTTGCGGCAGGATTAGCTACTGGGATTTGGAAAgaagattatattttcaatactGAGGAGAAGATGAAGAATGCCAATGTTTTCCGCCCCGTAATGGCTGAGGAAGTGAGGAAAAAGAAAGTGGACGGTTGGTGCAAAGCTGTTAGTAGAACTTTTGACTTAGCTGATCTTGCTCTTTGA 1557 0.465 MSKEDVFVGAIDQGTSSSRFIIYDACARPIGCHHVEFTQFYPQAGWVEHDPMEILESVKVCVAKAVDKATADGFNVDKGLKAIGLTNQRETTLLWSKSTGVPLYNAIVWMDARTSSVCRRLEKELSGGKSHFVESCGLPISTYFSAVKLLWLMENVDAVKEAIKKKDVLFGTIDTWLIWNLTGGVKGGLHVTDVSNASRTMLMNLKTLDWDASILETLKIPAEILPKIVSNAEIIGEIGLGWPIAGVPIAGCLGDQHAAMLGQACRKGEAKSTYGTGAFILLNTGEGIIQSKHGLLSTIAFKLGPQAPTNYALEGSVAIAGAAVQWLRDGLGIISSAPEIEDLALQVESTGGVYFVPAFNGLFAPWWRDDARGVCIGITRFTTKAHIARAVLESMCFQVKDVLDSMHKDSGAGESKAKFLLRVDGGATVNNLLMQTQADLMGTPVFRPADIETTALGAAFAAGLATGIWKEDYIFNTEEKMKNANVFRPVMAEEVRKKKVDGWCKAVSRTFDLADLAL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3456 518 Gene3D - 264 512 - -
Ssu4g3456 518 Gene3D - 3 263 - -
Ssu4g3456 518 SUPERFAMILY Actin-like ATPase domain 8 265 IPR043129 -
Ssu4g3456 518 PIRSF GlpK 6 517 IPR000577 GO:0005975|GO:0016301
Ssu4g3456 518 Pfam FGGY family of carbohydrate kinases, N-terminal domain 8 262 IPR018484 GO:0005975|GO:0016773
Ssu4g3456 518 PANTHER - 2 514 - -
Ssu4g3456 518 SUPERFAMILY Actin-like ATPase domain 265 511 IPR043129 -
Ssu4g3456 518 PANTHER SUGAR KINASE 2 514 - -
Ssu4g3456 518 TIGRFAM glycerol_kin: glycerol kinase 7 511 IPR005999 GO:0004370|GO:0006072
Ssu4g3456 518 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 143 155 IPR018483 GO:0005975|GO:0016773
Ssu4g3456 518 Pfam FGGY family of carbohydrate kinases, C-terminal domain 270 465 IPR018485 GO:0005975|GO:0016773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3456 K00864 - gmx:547750 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3456 4 85263274 85265699 Ssu4g3456 4 85263274 85265699 ECH