Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3452 ATGGCCTTTTCTGCTATGTTCACTCCCTCTCTCAACCTTTCCATTTTTTCCACCACATACTGTTGTAGAAGAAGAACATCATCAGCCACAGGCAGAGTTACAGTGAGAGCTAGCTCCACAGAGAAGGGTGAATCCAAGGGCAAGGACAAAGATGCCCCAGCGTTCAACCCTTTTGGGTTTGTCACTGACAACCCGTCTAGCCGCAGTGCGATTCAACTGCCTGAAAACCCTGCTGAGGATGGCAACGTTGGCCAAATGCTATATAGGATAGAAGACAAGGGCAAGGAATACGGGTCATATGTTAAATCTGGCAAGTTAAGATGGTTTGTGAGGGAAACTGGATCAGCAAATAGCAGAAGAGGAACAATTGTTTTCCTTCATGGGGCCCCAACGCAATCTTTTAGCTACCGAGTTGTTATGTCTCAGTTGTCGGATGCAGGGTTCCATTGCTTTGCACCAGACTGGATAGGATTTGGTTTCAGCGACAAACCACAACCAGGATATGGTTTTAATTACACAGAAAAGGAGTTCCATGATGCATTGGATAAACTGCTTGAGGTGTTGGGGGTCAAATCTCCCTTTTTCCTAGTTGTTCAGGGATTTCTTGTAGGTTCGTATGGACTAACTTGGGCCCTGAAGAACTCAAGCAAGATATCAAAGCTAGCAATACTAAACAGTCCATTAACAGATTCATCTCTCATTCCTGGACTTTTTCAGAAGCTAAGaaTTCCTCTATATGGTGAATTTACATGCCAGAATGCTATTATTGCTGAGCGGTTTATTGAAGGAGGCAGCCCTTATgttctgaaaaatgaaaaagctgaCGTGTACCGGCTACCTTATTTGGCAAGCAGTGGACCTGGATTTGCTCTGCTTGAAGCTGCAAGAAAAGCTAACTTCAAAGGTACTTTCAATGAAATAGCAGAAGGATTTGCAACTGAGAGATGGGATAAACCAATACTACTTGCTTGGGGATTATCAGACAAGTACTTGCCCCAGTCTGTGGCTGAGCAGTTTCAGAAAGGAAATCCAGCACACATCCAGCTTCAATTGATAGAAGGAGCTGGTCATATGCCACAAGAGGACTGGCCTGAGAAAGTTGTTGATGCTTTGAGAATGTTCTTCTGA 1128 0.4344 MAFSAMFTPSLNLSIFSTTYCCRRRTSSATGRVTVRASSTEKGESKGKDKDAPAFNPFGFVTDNPSSRSAIQLPENPAEDGNVGQMLYRIEDKGKEYGSYVKSGKLRWFVRETGSANSRRGTIVFLHGAPTQSFSYRVVMSQLSDAGFHCFAPDWIGFGFSDKPQPGYGFNYTEKEFHDALDKLLEVLGVKSPFFLVVQGFLVGSYGLTWALKNSSKISKLAILNSPLTDSSLIPGLFQKLRIPLYGEFTCQNAIIAERFIEGGSPYVLKNEKADVYRLPYLASSGPGFALLEAARKANFKGTFNEIAEGFATERWDKPILLAWGLSDKYLPQSVAEQFQKGNPAHIQLQLIEGAGHMPQEDWPEKVVDALRMFF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3452 375 PRINTS Alpha/beta hydrolase fold signature 147 162 IPR000073 -
Ssu4g3452 375 PRINTS Alpha/beta hydrolase fold signature 211 224 IPR000073 -
Ssu4g3452 375 PRINTS Alpha/beta hydrolase fold signature 320 334 IPR000073 -
Ssu4g3452 375 MobiDBLite consensus disorder prediction 31 55 - -
Ssu4g3452 375 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 96 375 - -
Ssu4g3452 375 Pfam Alpha/beta hydrolase family 123 370 IPR000073 -
Ssu4g3452 375 PRINTS Epoxide hydrolase signature 147 162 IPR000639 GO:0003824
Ssu4g3452 375 PRINTS Epoxide hydrolase signature 352 374 IPR000639 GO:0003824
Ssu4g3452 375 PRINTS Epoxide hydrolase signature 127 145 IPR000639 GO:0003824
Ssu4g3452 375 PANTHER HYDROLASE ALPHA/BETA FOLD FAMILY 96 375 - -
Ssu4g3452 375 Gene3D alpha/beta hydrolase 94 375 IPR029058 -
Ssu4g3452 375 SUPERFAMILY alpha/beta-Hydrolases 99 374 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3452 Ssu-Chr4 85176870 85182720 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3452 - - gmx:100807417 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3452 4 85176870 85182720 Ssu4g3452 4 85176870 85182720 ECH