Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3430 ATGGTCAACACAAGTCCTCTGCTCCCCGTTCTTCTCAAAGAACAACGTTGTTGCATTTTGCTCTGTTCCCACAACATGGCTTCGATCTCACAAGGTCTCGTGTTTACCACAGCCATGGTCTTCTCAACCACCCTGCTTTACCTTGCATTCTCTAGGCAAAAGACTTCCCTGCCATTTCAAATTCTCGGAAATTCTAATTCTCCACACCCAAACAAACAAATTCTACGCTCTTGCATATACTCAGatgagaaaaaaagggagaggaagaagaataagaagaagaaagtgaaaTTTGCGGAAAATGTGATGGTGAAGGAAGAAGCAAGAGATACTAacgagaaaaatagagaaaaacagGGGAGGCAAAACAGAGTGTCAAGCGGCGCGTGCACAAATGAAATCCAGGAAAATCGTGAAATGCCCGCGAACCGAATTGCTCTGTATAATGGGATTTTGAGGGATCGGGTGCAGAGGATGGCGTGCTGTCACTGA 492 0.3984 MVNTSPLLPVLLKEQRCCILLCSHNMASISQGLVFTTAMVFSTTLLYLAFSRQKTSLPFQILGNSNSPHPNKQILRSCIYSDEKKRERKKNKKKKVKFAENVMVKEEARDTNEKNREKQGRQNRVSSGACTNEIQENREMPANRIALYNGILRDRVQRMACCH 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3430 163 MobiDBLite consensus disorder prediction 122 136 - -
Ssu4g3430 163 Coils Coil 89 109 - -
Ssu4g3430 163 MobiDBLite consensus disorder prediction 107 121 - -
Ssu4g3430 163 PANTHER TRANSMEMBRANE PROTEIN 27 162 - -
Ssu4g3430 163 MobiDBLite consensus disorder prediction 107 136 - -
Ssu4g3430 163 PANTHER PROTEIN, PUTATIVE-RELATED 27 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3430 Ssu-Chr4 84925483 84926059 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3430 - - gmx:100786942 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0118 8 1891969 1892701 Ssu4g3430 4 84925483 84926059 PCT