Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3425 ATGATCCTTGCAGTGCTGTTTGCCAACGCTGAGGGCAATATCCTCATCGAACGTTTTCATGGAGTTCCTGTAGAGGAGCGTCTACACTGGCGTTCTTTCTTAGTCAAACTGGGAGCTGATAATCTTAAGGGTGTCAAAAACGAAGAACTCCTAGTTGCTTGCCACAAGTCAGTTTATATTGTATACACGGTGCTTGGGGATGTCAGCATCTACGTTGTGGGCAAGGACGAGTATGATGAACTTGCCTtGTCAGAAGTGATCTTTGTGATAACCTCAGCTGTGAAGGATGTATGTGGGAAGCCCCCAAGTGAGCGGCTTTTCCTTGACAAGTATGGAAGAATTTGCCTGTGTTTGGATGAAATTGTATGGAAGGTAAGGAGGCATGCAGAACAGTTTCAGTTatacaaaataacaagaaccagagtttttgaattgttttgtCAGTTTACTCTATCTGCTTGCCTCTGGAATTCATCAATTAATGACTTTCATGTGATATATGTAATCATAAGCAGGCATTGCTCATTTACTTATCTATATGATGGTGTCATCTGTTTTACATTAGGCCCATTAGTTAGACATTATCTTCTGCTATGTATGTGGTGGATGCCCTAA 615 0.3967 MILAVLFANAEGNILIERFHGVPVEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYIVYTVLGDVSIYVVGKDEYDELALSEVIFVITSAVKDVCGKPPSERLFLDKYGRICLCLDEIVWKVRRHAEQFQLYKITRTRVFELFCQFTLSACLWNSSINDFHVIYVIISRHCSFTYLYDGVICFTLGPLVRHYLLLCMWWMP 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3425 204 Gene3D - 1 131 - -
Ssu4g3425 204 PANTHER - 3 124 - -
Ssu4g3425 204 PANTHER ZETA-COAT PROTEIN 3 124 IPR039652 GO:0006890|GO:0030126
Ssu4g3425 204 SUPERFAMILY SNARE-like 1 123 IPR011012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3425 Ssu-Chr4 84865324 84867609 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3425 - - gmx:100305755 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3425 4 84865324 84867609 Ssu4g3425 4 84865324 84867609 ECH