Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3421 ATGGGAGCGGTGGAGAAGAAGCTGAAGGAGATGGATATTGAATATGTGCGGGCAACGGTAGAGGAAGGTGGGATCCAAGTAGATCAATTGTTTTTCCATGACCCTGATGGGTTCATGATCGAGATATGCAACTGTGATAGCCTTCCTGTGATTCCCTTGTTGGGTGAGGTGGCAAGATCATGTTCCCTTGTGAATCTTGAGAAGATGCAGAATCAGCAGCAGATACAGAAAATGCTCCAGCAACTGTGA 249 0.4659 MGAVEKKLKEMDIEYVRATVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLLGEVARSCSLVNLEKMQNQQQIQKMLQQL 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3421 82 PANTHER BNAC05G11680D PROTEIN 1 76 - -
Ssu4g3421 82 Gene3D - 1 82 IPR029068 -
Ssu4g3421 82 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 3 47 IPR029068 -
Ssu4g3421 82 PANTHER - 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3421 Ssu-Chr4 84816377 84816625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3421 - - pvu:PHAVU_010G154400g 134.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3421 4 84816377 84816625 Ssu4g3421 4 84816377 84816625 ECH
Ssu8g0131 8 2028709 2029971 Ssu4g3421 4 84816377 84816625 PCT