Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3417 ATGATGATGTTCGATTTCCTCCCTTTGGAGTCTACGTTGCTGGTGGCATGTCCAAGGCAGCATAAAAGTGGTGTCACGTATGAAACCAATGTAGAGATGTATAACTCACAGATTCACACATGGCAGGTTGTGGGGTCCATGTCTATTGAATTTGCTATTAGGCTTACTGTTTGGACACCCAATGAAAATATGTGCATCAAGAAAACATTGTATTGGATAACCTCAGCTATAGCCTACCATGTCATGGGCTTTAATGTTGGTACGGGTAGATGGAAGGAGATGGGTGTGCCTATGGCAAAAAGGCTAGAGTTTGCCACAATTGTGAGGCAGAATAAAGCATTAGTATTGGTTGGTGGCACATGCGGTGCGAGTGCTTGCATTTGGGAGTTGAATGAATGGGACAAATGGTGCTTAGTGGATAAGGTGCCACTTGAATTGGGGTTGAGATTGCTATTGGGGAAGATAATTTGGGAAAGCGCTAAGTGTGTGGTAGTTGTCAATGAGGTGCAAGAGTGGCTATCATATGTCATCTCATCTCATCTCGAGGTGAAATGGAAGGAGCCCTTAGGTGTTTGCAAGTTTGGGCTTGAATCTACAATTACGGTTGATATAAAGATACTTTCCAAGGCATATGATacaatagagaacaaaaagatgTTGCAGGAAATCCATTATGATGCATCTAAGGGTACATTAGTCATTTACATCGGTGACTAG 717 0.4156 MMMFDFLPLESTLLVACPRQHKSGVTYETNVEMYNSQIHTWQVVGSMSIEFAIRLTVWTPNENMCIKKTLYWITSAIAYHVMGFNVGTGRWKEMGVPMAKRLEFATIVRQNKALVLVGGTCGASACIWELNEWDKWCLVDKVPLELGLRLLLGKIIWESAKCVVVVNEVQEWLSYVISSHLEVKWKEPLGVCKFGLESTITVDIKILSKAYDTIENKKMLQEIHYDASKGTLVIYIGD 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3417 238 PANTHER F-BOX/KELCH-REPEAT PROTEIN 14 164 - -
Ssu4g3417 238 PANTHER F-BOX DOMAIN, GALACTOSE OXIDASE, BETA-PROPELLER-RELATED 14 164 - -
Ssu4g3417 238 SUPERFAMILY Kelch motif 25 140 IPR015915 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3417 - - gmx:100783227 218.779