Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3415 ATGGCGTTGTTCTCTGCAACTGCAACCATTCTTCCTCGAAACCTCGCCTTCGCTTCCTCCACCAAACTCTccctctctcactctcttctaCGCTCTTCCTCTCCGCGCTTCCTCTCATTCCCCACATCCCAATCAACACCACGCAATGGCGTGGCCATCTCTCTCCAAACCCCACGCGCCCACGCGGGCGCGTCTCCTTCCCCCTCCGCCTCATTCCACGGTCTCTGCTACGTGGTCGGGGACAACATCGACACCGACCAGATCATCCCCGCGGAGCACCTCACCCTCGTCCCCTCCAAGCCCGACGAGTACGAGAAGCTCGGCTCCCTCGCCCTCGTCGGCCTCCCCGCCGCCTACGCCGCGCGCTTCGTCGATCCCGGCCAGACCAAGACCAAGTATGCCATCGTCATCGCCGGCGCCAACTTCGGCTGCGGCTCCTCCCGCGAGCACGCGCCCGTCGCGCTCGGCGCCTCCGGCGCCTCCGCCGTGGTTGCCGAGTCCTACGCGCGCATCTTCTTCCGGAACTCCGTCGCCACCGGCGAGGTGTACCCGCTCGAGTCCGAGGGCCGCCTCTGCGAGGAGTGCCGCACCGGCGACGTGGTCACGATCGAGCTCGGGGAGAGCCGGTTGATCAATCACACCACCGGAAAGGAGTACCGGTTGAAACCCATCGGCGACGCGGGTCCGGTGATCGAGGCCGGTGGCATCTTTGCCTATGCGAGGAAAACCGGCATGATTCCCACTCGTTGA 750 0.6373 MALFSATATILPRNLAFASSTKLSLSHSLLRSSSPRFLSFPTSQSTPRNGVAISLQTPRAHAGASPSPSASFHGLCYVVGDNIDTDQIIPAEHLTLVPSKPDEYEKLGSLALVGLPAAYAARFVDPGQTKTKYAIVIAGANFGCGSSREHAPVALGASGASAVVAESYARIFFRNSVATGEVYPLESEGRLCEECRTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARKTGMIPTR 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3415 249 Pfam Aconitase C-terminal domain 131 180 IPR000573 -
Ssu4g3415 249 TIGRFAM LEUD_arch: 3-isopropylmalate dehydratase, small subunit 76 242 IPR011827 GO:0016836
Ssu4g3415 249 PANTHER BNAA05G34440D PROTEIN 10 248 - -
Ssu4g3415 249 CDD IPMI_Swivel 78 205 IPR033940 -
Ssu4g3415 249 SUPERFAMILY LeuD/IlvD-like 73 246 - -
Ssu4g3415 249 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 10 248 - -
Ssu4g3415 249 Gene3D Aconitase, domain 4 70 245 IPR015928 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3415 K01704 - gmx:100782688 391.349