Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3408 ATGGCGACATCCTTGTCAAACATGTTCTTGAAGGGAATCGCAGCTCGTTCTGTCAGCAGGCCCTTAAATGGTTTGTTTTATTGCTCGAGATTTTCGACTACTGTGTCAAATGGTTCTGACACACATGATGACTTCAAGCCAGCTAATAAGCTTGAGAGTTCTGGCATTTCTTTGACAAATGTTATTGAGCAGGATGTCAAGGATAATCCTGTTATGGTTTACATGAAAGGTGTGCCTGATTTTCCACAATGTGGATTTAGTTCGCTTGCTGTTAGAGTTTTAAACCACTATGATGTTCCTATAAGTGCTAGAAACATTTTGGAGGATGCTGAACTGAAAAGTGCTGTAAAAGCCTTCAGTAACTGGCCAACATTTCCTCAAATTTTCATTAAGGGAGAGTTCATTGGTGGATCAGATATTATTCTCAATATGCACCAGGTTTGTTCCCGTTTAaatgcttgttttttttttcacttgtgGCTATTATTATGTACTGTactgtttaataatattttatatctatgtAGACTGGTGAATTGA 540 0.3537 MATSLSNMFLKGIAARSVSRPLNGLFYCSRFSTTVSNGSDTHDDFKPANKLESSGISLTNVIEQDVKDNPVMVYMKGVPDFPQCGFSSLAVRVLNHYDVPISARNILEDAELKSAVKAFSNWPTFPQIFIKGEFIGGSDIILNMHQVCSRLNACFFFHLWLLLCTVLFNNILYLCRLVN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3408 179 CDD GRX_PICOT_like 62 146 IPR033658 -
Ssu4g3408 179 PANTHER GLUTAREDOXIN FAMILY MEMBER 1 147 IPR004480 -
Ssu4g3408 179 TIGRFAM TIGR00365: monothiol glutaredoxin, Grx4 family 60 147 IPR004480 -
Ssu4g3408 179 Gene3D Glutaredoxin 61 155 - -
Ssu4g3408 179 ProSiteProfiles Glutaredoxin domain profile. 59 162 - -
Ssu4g3408 179 SUPERFAMILY Thioredoxin-like 58 146 IPR036249 -
Ssu4g3408 179 Pfam Glutaredoxin 71 135 IPR002109 -
Ssu4g3408 179 PANTHER MONOTHIOL GLUTAREDOXIN-S15, MITOCHONDRIAL 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3408 Ssu-Chr4 84703141 84706499 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3408 - - gmx:100527610 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3408 4 84703141 84706499 Ssu4g3408 4 84703141 84706499 ECH