Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3396 ATGAAGTTTCCATTTTCAGCCGTTGTTGCTCTTTGGTTTGTTTGTGACCTTTGGGTCCTTGTTCTTGCAAATTCAGGCTTCCCTGAGGGAATGTATAGTTTTGATAGGAACTCTCATGCAACATATAAGTATGATCGCATGGGTGAAGTTCAGAAACAATGTGCTTCTGTGTTATCTGCTTCATCTGAATTGAGATATGAGTATAGTGTTACTGGTATGAAAGGAGAGCTTTCTTTTGTGAATGGGGATTGGAGGCAGGATGGGGGTAAGTTTCCCATAATGCCATTTGATGCTAGGAAATCTCCTGGAACCTTGTCTGACGACCGTGCTCCATTGAACTTGGTCTCTTTTTGGGTATTGGATGTTGATCATGACCACCGGTTGAAGAAGTCAATTCCCATCAATGGTTTCATGGTGATGGGCATTACTCGAGATGGTAATTTTGTGGACAACGGATATGATGGGAATCCTGAGTTTCAGTTATGGCCTAGCCATTCTCAGCTCTCAATTCCCTTCCAAGGGGTTTACActgaatcaaagaaaaatggtgGGGAAAGGGTATTGTGTTTGTTAGGGAACACTATGCTTCCAACTCGAGAGGCTGACCCTGCCAACCCGTGGGAATGGATGAAGAATCCTGGCGATATACCGTTGTCAGAAGATGATCAAATTATGCTAGTTCTTCGCTATCCCATGACATTCACATTAACAAACAGGATGATCAGCGGAGAGTTAAGAAGCTTGAACCGTGAATCCAATTCTAAATACTTTGATGTGGTTCACATATCATCGCAGTTGGGCAAGTCAGCGAAGTACACATTTGGCTCACAACAGATTGTATCCAAAGCATGCAATCCATACCCATTTAAAGATAACCTGATTGATGATGGCATTAGCGTCTACAAAGGGGCAAGGTTTTGTGAAATTCTTGAAGAAATTAATAGAGAAAAACCTTTATCTGTTGTGCCAAACTGGAGATGCAATGGCACGGATGATTTCTGCAGTAAATTAGGTCCTTTTTTGTCGGATAAGGAAATCAAATCAACAGATGGAGGCTTTCAAGATGTTAAACTTTATATGCAGGATGTTATCTGTGAGCAAGCAGCTAGTAAGAGTAATACTGGTTCTGCCAGGGTATCAACGGTTTTTAGAGCAGTTTCTCCATCAGAGAATCAGTATACTGCAGCAAAAAGATCTGGGCCCAGCAACACGTCTCTTGCTGCTGAAGGGATTTGGAAGTCTTCTAGCGGGCAGCTTTGCATGGTTGGTTGCCTTGGATTTATTGATGCCAAAGGGAGTAACTGTAATACACGGATCTGTATGTATATTCCTACCACTTTTTCCTTAAAGCAACATAGCATTATTTTGGGAACTTTGTTTCCCATTAATAACAGCAGTGCCTTCTTTCCCCTATCATTTGAGCAACTTGTGCTACCTTCAGAACTCTGGAATTATTTCAAGCTCACTAATCCAAATTACAGTTACTCTAAAACTAATTTGGCTGGTACTATCCTAGAAAAAAATGAGCCCTTCAGTTTTACAACTGTCATTAAGAAATCATTGCTAACATTCCCCAAACTTGAAGATAATGAGGCATTCCAAGATAGTCTGTCTCTTCTTTCAGAAGATCTCACTTTTCATGTCTCTGGTTTTCCTGACCCTATGCCTAATGTCCTAGCCCCAAGAGTTGACATTCAGATGGAGATTCTCTCCGTTGGTCCCTTGTTTGGACGCTATTGGTATGCTCAAAATGGTTCAACATCTGAACAGGAAACACCATATCATGCCGAGGCTGCTGAATATACAGAAAAACAGCTTCTTATAAATGTATCAGCACAACTCAGTCTTACTGGAAAAGATTATAGTGATTTTTCTGTGCTTTTTCTGGAGGGTCTTTATGATCCACATGTTGGAAAGATGTATCTAATTGGTTGCAGAGATGTGCGAGCATCATGGAAGGTCTTATATCAGAGCTATGATCTTGAGGCTGGAATGGATTGTTTGATTGAGGTGGTTGTGGCTTATCCTCCTACTACAACTCGGTGGCTAGTCAACCCCAAAGCTACAATTTCGATAGAAAGTCAAAGGACTGATGATGACGCCCTTCGATTTGATACAATAAAGCTCCAAACATTTCCAATTATATACAGGAAGCAGCGTGAGGATGTCCTCTCACGCAAAGGTGTTGAAGGGATTCTCCGAATCTTGACGCTTTCATTTGCGATTGGGTGCATTTTAAGCCAACTGTTTTATATAAAGCATAATGTGGATTCTCTTCCATATATATCTCTTGTCGTGCTAGGTGTTCAAGCTCTTGGGTATAGCATTCCTCTGGTCACAGGTGCAGAAgctctttttaagaaaatggttTCTGAATCTTATGAAGTGTCATCCAGTGAATTGGAGAGCAGTGAGTGGCTCCATGTCATTGATTACACTGTGAAACTGCTGTTGATTGTATCATTGCTAGTAACCCTGCGACTTTTTCAGAAGGTATGGAAGTCTCGCATCAGATTGCAAACACGTACCCCTCCTGAGCCACATTGTGTCCCCAGTGATAAATGGGTATTTCTTTGTACATTCACCATACATGTGATAGGCTATGTAATTGTTCTAATAATTCATGGCACAAAGACCAGTCAGAAGGCTCTTATAGCAAAGACATATTTGGTTGATGGAGGAAACTCTCATTCATTGCCGGATTGGGTAACAGAATTGGGAGAATATGTAGGTCTTGTTGAAGACTTTTTCTTGCTTCCTCAAGTTATTGGAAACTTAATCTGGCATATTGATTGTAAACCACTCagaaaactatattttattggaATCACTGTGGTCAGACTTCTTCCTCATATATATGATTACATTCGAGTTCCAGTTCCGAATCCTTACTTTTCTGAGGACTCTGAATTTGTCAAtccaaatttggatttttactcaaaatttgggGATATTGCCATTCCTGTGACTGCTATTATTCTTGCTATTTTGGTCTATATTCAACAAAGATGGAGCTATGAGAAGCTGAGTCAGTTTCTGACATTTGGGCAGTATAAGCTTCTCCCAACTTTCAGATACCAGAGGTTGTCTTCTAGGTGTTGTGAATCTGAACTAGTTCCTGCTATCAATGGTGCTGTTGCAAGAGAGAAAGAGCAAGTTGATGTAGAATGA 3171 0.3977 MKFPFSAVVALWFVCDLWVLVLANSGFPEGMYSFDRNSHATYKYDRMGEVQKQCASVLSASSELRYEYSVTGMKGELSFVNGDWRQDGGKFPIMPFDARKSPGTLSDDRAPLNLVSFWVLDVDHDHRLKKSIPINGFMVMGITRDGNFVDNGYDGNPEFQLWPSHSQLSIPFQGVYTESKKNGGERVLCLLGNTMLPTREADPANPWEWMKNPGDIPLSEDDQIMLVLRYPMTFTLTNRMISGELRSLNRESNSKYFDVVHISSQLGKSAKYTFGSQQIVSKACNPYPFKDNLIDDGISVYKGARFCEILEEINREKPLSVVPNWRCNGTDDFCSKLGPFLSDKEIKSTDGGFQDVKLYMQDVICEQAASKSNTGSARVSTVFRAVSPSENQYTAAKRSGPSNTSLAAEGIWKSSSGQLCMVGCLGFIDAKGSNCNTRICMYIPTTFSLKQHSIILGTLFPINNSSAFFPLSFEQLVLPSELWNYFKLTNPNYSYSKTNLAGTILEKNEPFSFTTVIKKSLLTFPKLEDNEAFQDSLSLLSEDLTFHVSGFPDPMPNVLAPRVDIQMEILSVGPLFGRYWYAQNGSTSEQETPYHAEAAEYTEKQLLINVSAQLSLTGKDYSDFSVLFLEGLYDPHVGKMYLIGCRDVRASWKVLYQSYDLEAGMDCLIEVVVAYPPTTTRWLVNPKATISIESQRTDDDALRFDTIKLQTFPIIYRKQREDVLSRKGVEGILRILTLSFAIGCILSQLFYIKHNVDSLPYISLVVLGVQALGYSIPLVTGAEALFKKMVSESYEVSSSELESSEWLHVIDYTVKLLLIVSLLVTLRLFQKVWKSRIRLQTRTPPEPHCVPSDKWVFLCTFTIHVIGYVIVLIIHGTKTSQKALIAKTYLVDGGNSHSLPDWVTELGEYVGLVEDFFLLPQVIGNLIWHIDCKPLRKLYFIGITVVRLLPHIYDYIRVPVPNPYFSEDSEFVNPNLDFYSKFGDIAIPVTAIILAILVYIQQRWSYEKLSQFLTFGQYKLLPTFRYQRLSSRCCESELVPAINGAVAREKEQVDVE 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3396 1056 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 20 1037 IPR021319 -
Ssu4g3396 1056 Pfam Protein of unknown function (DUF2921) 51 1010 IPR021319 -
Ssu4g3396 1056 PANTHER PII, URIDYLYLTRANSFERASE (DUF2921) 20 1037 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3396 Ssu-Chr4 84544675 84547845 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3396 - - gmx:100794859 1919.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3396 4 84544675 84547845 Ssu4g3396 4 84544675 84547845 ECH