Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3362 ATGACGGCCCTTGAAGATGGAGCCACTTGGAGAAAGCCACTCCCTTTCACAGCAGAACCGCAAATGCTGCTAAGAGAAACCTTTCGCAAGACCAGGGTCTTTTTTCACAAAAGCCTCCGACATTTTTGGTCTTTCTTCTTTGGAGAGTACCAGAAACTTTCCAGATCACTTTCCGTCAACCCATTCCTTTGTAGAATTGGCCATGCAAGAACTCATACAAGCGACCAATTTTACAATGAGTATTATGATCTGCTGCAGTCTGACCTCGGCAGAATAAAGATGTATGGTAACAACATGTCCAGGTCAGCAATGGAAGATGCTGCATGTACTGGAAGCTTCATGTGTTTTGCCAAGCAAAGTCCACTAAAGAGCATCCACGAGGAGAGAGCacaagagaagaagaacaaagGGAGCTCACACCTCAGAAAAAAGGAGGACTTAAATTCACAAAACATTAACAAGGGAGCTCATGTTTTAGCTCAAAAGATGAAGGCATTGGATATGATGGATGCAGGAGGTGATCTAGAGCATGTGCTAGACATAGAAGAGGCTCTCCACTATTATTGTCGCCTTAAGAGCCCTGTTTATTTAGATATTGTGGACAAGTTTTTCATGGACATACAATCGGAGATCTCTGTTCCGCAGCCCTGTGCCAGCCTCAAACCCAAAAAGGCTAGACTTGGCCCAATCCGGTTGTAG 699 0.4349 MTALEDGATWRKPLPFTAEPQMLLRETFRKTRVFFHKSLRHFWSFFFGEYQKLSRSLSVNPFLCRIGHARTHTSDQFYNEYYDLLQSDLGRIKMYGNNMSRSAMEDAACTGSFMCFAKQSPLKSIHEERAQEKKNKGSSHLRKKEDLNSQNINKGAHVLAQKMKALDMMDAGGDLEHVLDIEEALHYYCRLKSPVYLDIVDKFFMDIQSEISVPQPCASLKPKKARLGPIRL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3362 232 MobiDBLite consensus disorder prediction 128 147 - -
Ssu4g3362 232 PANTHER RNA HELICASE DDX11-LIKE PROTEIN, PUTATIVE-RELATED 22 232 - -
Ssu4g3362 232 PANTHER BNAANNG14610D PROTEIN 22 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3362 Ssu-Chr4 84042779 84043477 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3362 - - gmx:100305733 338.576