Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3353 ATGGGATCAATTGGGGTGCTCCTCATGGTTCAGGTGATACCCTACCTGGAGCAAGAGCTGGACAAGCGCTACAGGCTGTTCCGGGTATGGGATTACCCGCAGAAGGCGCAGTTGCTGAGCGAGCACGCCGCCTCCATCCGTGCGGTGGTCGGAAACGCCGGCGCCGGCGCCGACGCGGGGCTGATCGAGGCGCTGCCGAAGCTGGAGATCGTGTCCAGCTTCAGCGTGGGAGTGGACAAGATAGACTTGGAGAAGTGCAAGGAGAAGGGGATTCGAGTCACCAACACGCCCGACGTGCTGACCGACGAAGTCGCCGACCTCGCCATCGGCTTGATCCTCGCGCTCCTCAGGAGGATCTGCGAGTGCGATCGCTACGTCCGAAGCGGCAAATGGAAGCAAGGTGACTACAGGCTGACCACTAAGGTTGGTTTCTGCATTCTCTTCTTTTACAAGGACAAGTGCTATTCTCTTAATTTAAGTTGGTGA 486 0.5802 MGSIGVLLMVQVIPYLEQELDKRYRLFRVWDYPQKAQLLSEHAASIRAVVGNAGAGADAGLIEALPKLEIVSSFSVGVDKIDLEKCKEKGIRVTNTPDVLTDEVADLAIGLILALLRRICECDRYVRSGKWKQGDYRLTTKVGFCILFFYKDKCYSLNLSW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3353 161 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 108 IPR006139 GO:0016616|GO:0051287
Ssu4g3353 161 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 1 142 - -
Ssu4g3353 161 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 6 136 - -
Ssu4g3353 161 Gene3D - 2 124 - -
Ssu4g3353 161 PANTHER HYDROXYPHENYLPYRUVATE REDUCTASE-LIKE 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3353 Ssu-Chr4 83968633 83969118 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3353 - K18606 gmx:100779623 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3353 4 83968633 83969118 Ssu4g3353 4 83968633 83969118 ECH