Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3350 ATGGCAACCTTAGCTGCCGTTCAACCCGCTGCGGTCAATGGCCTTGCTGGAAGTTCCTTTACTGGAGCTAAGCTCTCTTTCAAGCCCTCTCGCCAGAGTTTCAAATCCAAGAACTTCAGGAGTGGTGCCGTGGTAGCAAAGTATGGTGACAAGAGTGTGTACTTTGATTTGGAAGATATCGGTAACACTACAGGACAGTGGGACTTGTATGGTTCAGATGCACCTTCACCCTACAACCCTCTTCAGAGTAAGTTCTTCGAGACGTTTGCTGCCCCATTCACAAAGAGGGGATTGTTACTCAAGTTTCTGATATTGGGAGGTGGTTCCACCCTCGCATACTTCAGTGCAACAGCCTCAGGTGACATTCTACCAATCAAGAAGGGCCCACAACTTCCACCAAAGCTCGGTCCTCGTGGCAAGATCTAA 426 0.4906 MATLAAVQPAAVNGLAGSSFTGAKLSFKPSRQSFKSKNFRSGAVVAKYGDKSVYFDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIKKGPQLPPKLGPRGKI 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3350 141 Pfam Photosystem I reaction centre subunit VI 4 141 IPR004928 GO:0009522|GO:0009538|GO:0015979
Ssu4g3350 141 Gene3D - 95 117 - -
Ssu4g3350 141 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC 1 141 IPR004928 GO:0009522|GO:0009538|GO:0015979
Ssu4g3350 141 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC-LIKE 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3350 Ssu-Chr4 83943676 83944566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3350 K02695 - gmx:100499832 239.195