Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3348 ATGGCTTCCATTTTTGCCAGCTTGCCGCCACCATTGCTAGTCCCTGCTAGAAAATCACATCCACGGAACTTCCCAACTTTCCCTGTTTCTCTTCCTTCAGGGAGACAAAATCATGTTTCTTTTGTTGCGAAGGCTTCTGGAGAAAGTTCTGAATCTTCAACTACCCTTACTGTTTTTAAGTCTGTTCAGAATGTTTGGGATAAACCTGAGGACCGATTGGGACTTATTGGTTTGGGATTTGCAGCCATAGCAGCACTTTGGGCATCAACAAATTTGATTGCGGCCATTGACAAATTGCCACTTATCCCAACTACACTGGAATTAATTGGAATATTTTACTCCGTGTGGTTTACTTAtcgttatctcatattcaagcCTGACCGGGAAGAGCTTTTTCAAATCTTGAACAAGTCAGCATCAGATATCTTGGGCCAGTAA 438 0.4064 MASIFASLPPPLLVPARKSHPRNFPTFPVSLPSGRQNHVSFVAKASGESSESSTTLTVFKSVQNVWDKPEDRLGLIGLGFAAIAALWASTNLIAAIDKLPLIPTTLELIGIFYSVWFTYRYLIFKPDREELFQILNKSASDILGQ 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3348 145 PANTHER PROTEIN CURVATURE THYLAKOID 1C, CHLOROPLASTIC 1 145 - -
Ssu4g3348 145 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 61 144 IPR025564 -
Ssu4g3348 145 PANTHER - 1 145 IPR033344 GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3348 Ssu-Chr4 83916270 83920303 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3348 - - gmx:100306487 235.728