Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3339 ATGGACAAAACTGCGGGTTGGTCCACTTTTGTGAAAGCGTCATATAAACCAGAACATTTCACCAATTTCAATCTCTCACCCCTTCCATTTCTGAAGCTGAATACGCCCAATTTGAGCTTTCGTGGGACCAACACCGTACATAATAAGCGACCCAATTGGCCAAAGCCTTTGTCACTGCGCTCAAAATCTGCGCTTGCTGGGGCTGACCCCTTGGAAATGGCACAGGATTGGCACCGCACGGCCCTTCTTGTGATCGACATGCAGaAAGATTTTATAGAAGACGGGGGTCCCATGCTAGTAAAAGGAGGGAAAGACATTGTCCCAAATGTGATTAAGGCTGTCGATGTTGCTAGGCACCGTGGAATTCTCATAGTTTGGGTAGTACGGGAACATGATCCCTTAGGAAGAGATGTTGAGCTCTTTCGTCGGCATCTATATTCAGCAGAGAAAGTTGGTCCAACCTCTGAAGGAAGTGAAGGAGCAGAATTAGTTGATGGGTTGGTAATTAAAGAAGGGGATTATAAACTTGTGAAGACAAGGTTTAGTGCATTCTTTGCTACACACCTTCATTCCGTCCTTCAAGGAGCAGGAATTAACAGTCTGGTGGTCACTGGTGTTCAAACTCCTAACTGTATTAGGCAAACTGTCTATGATGCTGTAGCATTGGACTATCAACCTGTATCTGTTATTGTTGATGCTACAGCAGCAGCCACACCTGATATTCATCTCGCCAATGTGTTTGACATGAAAAATATTGGAGTTGCAACCCCGACATTACAAGAATGGAGCGAACCCAAAGCTTGA 804 0.4502 MDKTAGWSTFVKASYKPEHFTNFNLSPLPFLKLNTPNLSFRGTNTVHNKRPNWPKPLSLRSKSALAGADPLEMAQDWHRTALLVIDMQKDFIEDGGPMLVKGGKDIVPNVIKAVDVARHRGILIVWVVREHDPLGRDVELFRRHLYSAEKVGPTSEGSEGAELVDGLVIKEGDYKLVKTRFSAFFATHLHSVLQGAGINSLVVTGVQTPNCIRQTVYDAVALDYQPVSVIVDATAAATPDIHLANVFDMKNIGVATPTLQEWSEPKA 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3339 267 CDD cysteine_hydrolases 81 250 - -
Ssu4g3339 267 Gene3D - 59 266 IPR036380 -
Ssu4g3339 267 Pfam Isochorismatase family 80 255 IPR000868 -
Ssu4g3339 267 PANTHER OS02G0276400 PROTEIN 71 264 - -
Ssu4g3339 267 SUPERFAMILY Isochorismatase-like hydrolases 71 263 IPR036380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3339 Ssu-Chr4 83795599 83798037 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3339 - - gmx:100527482 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3339 4 83795599 83798037 Ssu4g3339 4 83795599 83798037 ECH