Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3336 ATGGCTTCGTCTCTCCTCCAAAACCCCACCTTCCTTAAACCCCAATCTTTTCTAATCCCGAAGCCCCCAGCCACGACGGCCACGCGCGGGGGTTACGTTCGGGTGCGGTGCGGCGGGCCGCGGTCCCAGCGTGGACCTCTGATGAAGGGTCGAATCCTGAGCATCGAAGCAATCCAAGCCATCCAAACCCTAAAACGCCTCCACCGAACCAACCCCCCCAACCTCTCCCAACTCGTCTCCAACACCCTCACGCGCCTCATCAAGTTCGACCTCCTCGCTACCCTGCGGGAGCTCCTACGCCAGCAGCACTGCACCATCGCCCTCCGCGTCTTCTCCACCCTCCGATCCGAATACGGCGCCGACCTATCCCTCTACGCCGAGATGGTGCAGGCCCTTGCCGCCGCCGACATGTCGGACGATGTAGACCGTCTGATCCTCGACCTGGAGGAAGGGAGTGGGATCCCATGTGATGATCCCAAGGGGCTTGTTAGCTTGATCAAGGCCGTTATTGCTGCTAAGAGCAGAGAATCGACGGTCAGGATTTATGGGCTAATGAAGAAGAGTGGATATGGGTCGGTTACCGAGCCCGATGAGTACGTCGTTAAGGTTTTGGTTAATGGGCTCAGGAGTTTAGGGGAAGTGGCTCTTGCCAAAGAACTTGAAGATCAATACAAAAGGGGGCTTCCTAAGTTCTCTAGGGCCCAATTCGACACATTGCcgatttag 726 0.5661 MASSLLQNPTFLKPQSFLIPKPPATTATRGGYVRVRCGGPRSQRGPLMKGRILSIEAIQAIQTLKRLHRTNPPNLSQLVSNTLTRLIKFDLLATLRELLRQQHCTIALRVFSTLRSEYGADLSLYAEMVQALAAADMSDDVDRLILDLEEGSGIPCDDPKGLVSLIKAVIAAKSRESTVRIYGLMKKSGYGSVTEPDEYVVKVLVNGLRSLGEVALAKELEDQYKRGLPKFSRAQFDTLPI 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3336 241 Gene3D Tetratricopeptide repeat domain 52 226 IPR011990 GO:0005515
Ssu4g3336 241 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 5 232 IPR044190 GO:0000373|GO:0003723|GO:0009658
Ssu4g3336 241 PANTHER PROTEIN THYLAKOID ASSEMBLY 8, CHLOROPLASTIC 5 232 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3336 - - gmx:100799612 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3336 4 83766175 83766900 Ssu4g3336 4 83766175 83766900 ECH