Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3331 ATGGCTACTCACTTGTACCTGCAACACCAGCTATTCAACTACCCCAGATCCGTGGGATTAGATGTCAGAAAAAAGACGACCGCTTATGCCCTTCAACATGCCAATTCAAATGCATTAGATGAGAGGGACAATAGCTCTTCGAATAGTGGCATGTTAGTTGGATCTGTGTCTGTATGTTACACATCATTAAAAAAGTGTTCGTCATTGGCAGCATCAGCTAAGGCTCATTTTTCCTGTAATGATCAAAGCAAAGAAGCAGATAAGGTTACCAATGTTACATCCACTAGTCAGGGAATGGAATTTAATAGGGTGGATTGTGTTGTGTGGTTACTGCATGAATCTTCTAGGAGCTTTTCCCAAGCAATCAACTCGCTTGGACTGGCAAGGAGTGGTCCAGCTCTTGCAATGGCTTGGATTGGGAAGGATGTGCATGAATGGCATAGACGTATTGCTTATCAGGTTGCAGTTTATGCTTTAATGAAAGCAGCAATTGATTTGGAGATATTGCTTTCACATGAACGACTAAATGAATTTTCCCCAGTTAAAGAGATTTTGAGCCCATTAATGAATCAAATGGGAGAGCACATTGAAATTCGACTGAAAACAAAGCATCCATATTTGGTGCAGTGGTTTAAAGACACTGAAATGCCGCGAACAGCAGGATATTTTATTCCACTTCTAAAAAAGTGGTCCGTGGAATATGCAGGAAGCGGTATTGCAGGAATTATTGTGGCTATAACCTGTTGTAGTGCAGTGGTGAAATTGGGCTCTAGGCGCATCTGCTGCCCCTTACTTGTACTGTCTCTTGAAGATGCTTTGGTCAAGCTCATGGATTTTTCACTCAATCTTGCATCTGTGGACAAGTTACACCAGTTAGCAACTGAGGCAGGATTTGAACTGAATTTCTTGTCTCATTTTGGTGGGAAGGTTTTTCCCAGTGAAAAAAGTGAAGACCTAGagttttggattggtttggcCCATAAGAAACTATTGAAAGCTTTCAGTGAAGAAAGCATCATTTCaaagaatcaaaattttcaGCAAAAGATACAAGCAGATAGTTTGGCCACATTGGGACTTTTTACATATCTTGGAAGAAGGACTAGAATATTTTTGTCAGCAATGGGCATTAAGGATCTTGACGGAATAGTTAAGGACTTCCTCAGTTACTTGGAATGTGGCATTCTTTTCATTTATCCAGAATTTTCCTCCATCAGAGTGTATCAGTGTTTCATGGAGGTGGTAACTGATGAGATAGGATGGCTTGATTTTTATGCTTCATATGTACAAATAAACTGCAAGGAGAAAAAGTCTAAACATAATGCTCGCCAGGCAGAGAAAGAGATAATTTCTTCTGTAGTTTTTACTGTGTGCTATGATGTTTTCTCTGGGTTTGCACACTTCATTCGCTCAACTCAACAATCATTGGACACAGCTTCACGGTCATACTTGCTTCGCtgTCAGGGTCTGCTAAGTACTTGTCTGCAATATCACTGGGCTGCTTATGACAAATCAGGGGAATTGCTAAATATTGTGGATCATGCTGCATTTGACAACCATACATCATATATGGGAAGTATAAATGGACCCAAGTTACCTCTGGTGTTTGAAGTGCAGCAGATGTCACATGATTTAACTAAAGAAGGATGTCCAAAGAGTAATTCTCGAAACAGTTCTGTATTCAAAAAGgctCCAATTTCAGCAATCGCAAGCAAAAACACATATGGGAAAGATTCCTGCATTGACAAGTCAAATCCTCAGTGTGAAAGTTTTATCAAGAGATACAGAATCAAGTTGGCATCCACGAGTGCAGACCTCTGGATGGGTACTCTGTTGCTCTTCATAGACATTATGGTTGCTTTAGAGCTACTTATAAGGCAAGCACATGGCTGCAAGACTTCAGGGAGTCAAAGAAAGAGGCTAAACAGAACCATGACTGACATAATTGTGCTAATTCCAGTGACAATCTTGATGCTACTTCCGGTAACAGCTGTAGGTCATGTAGCCATTCTAGCAGCTATCAAAAAGTATATGCCATTCTTGATCCCGTCATCTTATTCTTCAGAGCGCTTGGATGTTGTAAAGCGAATAAAGCACACTAGAGAGATGGGTGATCAGTTACATTTGGCTCAGTTTGACCTTGAAGATCAACCAGCAACCATTTCTTGA 2169 0.3988 MATHLYLQHQLFNYPRSVGLDVRKKTTAYALQHANSNALDERDNSSSNSGMLVGSVSVCYTSLKKCSSLAASAKAHFSCNDQSKEADKVTNVTSTSQGMEFNRVDCVVWLLHESSRSFSQAINSLGLARSGPALAMAWIGKDVHEWHRRIAYQVAVYALMKAAIDLEILLSHERLNEFSPVKEILSPLMNQMGEHIEIRLKTKHPYLVQWFKDTEMPRTAGYFIPLLKKWSVEYAGSGIAGIIVAITCCSAVVKLGSRRICCPLLVLSLEDALVKLMDFSLNLASVDKLHQLATEAGFELNFLSHFGGKVFPSEKSEDLEFWIGLAHKKLLKAFSEESIISKNQNFQQKIQADSLATLGLFTYLGRRTRIFLSAMGIKDLDGIVKDFLSYLECGILFIYPEFSSIRVYQCFMEVVTDEIGWLDFYASYVQINCKEKKSKHNARQAEKEIISSVVFTVCYDVFSGFAHFIRSTQQSLDTASRSYLLRCQGLLSTCLQYHWAAYDKSGELLNIVDHAAFDNHTSYMGSINGPKLPLVFEVQQMSHDLTKEGCPKSNSRNSSVFKKAPISAIASKNTYGKDSCIDKSNPQCESFIKRYRIKLASTSADLWMGTLLLFIDIMVALELLIRQAHGCKTSGSQRKRLNRTMTDIIVLIPVTILMLLPVTAVGHVAILAAIKKYMPFLIPSSYSSERLDVVKRIKHTREMGDQLHLAQFDLEDQPATIS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3331 722 PANTHER LETM1 AND EF-HAND DOMAIN-CONTAINING PROTEIN ANON-60DA ISOFORM 1 11 712 - -
Ssu4g3331 722 PANTHER LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN 11 712 IPR044202 GO:0005743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3331 Ssu-Chr4 83719723 83725779 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3331 595 686 EF-hand Containing Proteins AT3G59820 30.435 5.76e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3331 - - gmx:102668384 1275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3331 4 83719723 83725779 Ssu4g3331 4 83719723 83725779 ECH