Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3325 ATGGTGAGTGAGCAGAGAACACCAGAGGAGACCCTGCAGGAGTCAAAGGTGGCGGCTTTGGAGAGCAGTGGCACAATGAGCGGACCCCTCGTCGGAGCCGCCGCCGGGACCCGCCAGCGCCGGAGGGCGGAGGCCATGCAATTGGTTCTGAGAGCATTGTGCATGGCCACCTCTGTTGTTGCGATCTCAGTCATGGTAACTGCCAAGGAATCTAGCTCTGTCTCCATCTATGGCtttctcttacctcttcattCCAAGTGGTCTTTCTCTGAGTCCTATGAATATCTTGTTGGGGTTTCTGCTGCTGTCGCAGCGCATTCCTTGCTGCAACTACTCATTGGCACGTCGAGATTTCTTAGGATGTCTTCTGTGATTCCTTCCAGAAATCATGCATGGCTTATTTTTGCTGGGGATCAGGCATTTGCTTATGCATTGATGAGTGCTGGATCTGCTGCATCTGGGGTGACCAATCTGAATCGCACAGGAATTAGACATACGGCTCTGCCAAATTTTTGCAAGCCTTTGCACAAGTTTTGTGACCATGTTGCCATCTCAATAGCCTTCACTTTCACCAGCTGTTTTTTGCTGGCTACATCTGCTGTCCAGGATGTAATATGGCTCTCCCTACACTGA 633 0.4976 MVSEQRTPEETLQESKVAALESSGTMSGPLVGAAAGTRQRRRAEAMQLVLRALCMATSVVAISVMVTAKESSSVSIYGFLLPLHSKWSFSESYEYLVGVSAAVAAHSLLQLLIGTSRFLRMSSVIPSRNHAWLIFAGDQAFAYALMSAGSAASGVTNLNRTGIRHTALPNFCKPLHKFCDHVAISIAFTFTSCFLLATSAVQDVIWLSLH 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3325 210 MobiDBLite consensus disorder prediction 1 24 - -
Ssu4g3325 210 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 48 198 IPR006459 -
Ssu4g3325 210 PANTHER CASP-LIKE PROTEIN 3A2 6 208 - -
Ssu4g3325 210 Pfam Casparian strip membrane protein domain 41 194 IPR006702 -
Ssu4g3325 210 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 6 208 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3325 41 210 Miscellaneous Gene Families AT3G16300 53.529 1.33e-56 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3325 - - gmx:100783028 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3325 4 83640269 83642642 Ssu4g3325 4 83640269 83642642 ECH