Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3305 ATGAAGGTCCTTGTTTTCTTTGTTGCTATAATTCTAGCAGCATGGCAATGCCATGGCAGAGACCATGGTGCAACCTACCAAATTTTCCCTCTCCGAATGAAATCTGGCTCTGGTGGCCACTACATTCCGGAGATAACATGCACAAGTTGGAGGCTTGGTGTGGAAGCACATAACGTCATTGACTGGAAAACTGTCCCTCTAGATTGCGAAGGATATATAGGGAACTATATTCTAGGTGACCAATATAGATCAGACTCCAAAACAGTTTGCCGTGAAGCTTATCTTTATGCTAAAACCCTCAATATAACTGCCAATTACATATGGGTGTTCGACATAGATGAGACTACACTGTCTAATCTCCCGTATTATGCTGACCATGGATTTGGGGTGGAACCATATAATGCGACGGCGTTTAATGAATGGGTTGACCTTGGCGAGGCACCGGCACTGCCGGAGAGTCTTAAACTGTACAAGAAACTGGTGTCCCTTGGCATCAAGATTGTCTTCTTAACAGGACGACCACTGGATCAAAAGGCTGTAACAGCTACCAACTTAAAGCTTGCTGGATACCACGCATGGGAAAAGTTAATTTGCAAGGATACATCTATATACTCTGGTTCGACAGCAGTTACATACAAATCAGCTGAGAGAAAGAAGCTGGAGGAAAGTGGATACAAAATCATTGGAAACATTGGAGACCAATGGAGCGATATCCTGGGAAACAACACAGGCGATAGGACCTTTAAGCTGCCTGATCCACTCTACTACATTAGTTGA 777 0.4389 MKVLVFFVAIILAAWQCHGRDHGATYQIFPLRMKSGSGGHYIPEITCTSWRLGVEAHNVIDWKTVPLDCEGYIGNYILGDQYRSDSKTVCREAYLYAKTLNITANYIWVFDIDETTLSNLPYYADHGFGVEPYNATAFNEWVDLGEAPALPESLKLYKKLVSLGIKIVFLTGRPLDQKAVTATNLKLAGYHAWEKLICKDTSIYSGSTAVTYKSAERKKLEESGYKIIGNIGDQWSDILGNNTGDRTFKLPDPLYYIS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3305 258 TIGRFAM plant-AP: plant acid phosphatase 44 257 IPR010028 GO:0003993
Ssu4g3305 258 PIRSF VSP 1 258 IPR014403 -
Ssu4g3305 258 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 2 257 - -
Ssu4g3305 258 SUPERFAMILY HAD-like 98 253 IPR036412 -
Ssu4g3305 258 CDD HAD_VSP 75 257 - -
Ssu4g3305 258 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 39 257 IPR005519 -
Ssu4g3305 258 Gene3D - 42 258 IPR023214 -
Ssu4g3305 258 PANTHER VEGETATIVE STORAGE PROTEIN 1-RELATED 2 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3305 Ssu-Chr4 83298710 83303626 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3305 - - gmx:547669 464.922