Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3302 ATGTTTAGCGAGCAATTTGGATCAGACTCCAAATTGGTTAACCAACAAGCTTATTTCTATGCTAGAACCCTCAATATCGCTGACAAAGACGTATTTGTGTTCAGCGTAGATATGACCGTACTGTCTAATCTCCCATATTACAAAGATCATGGATTTGGGACGGAACCATATAATGCGACGTTGTACGATGCATGGGTATTGCTTGGCGAGGCAACGACAATGCGGGAGACCAAAAAATTGTACGACAAACTGCTGGCTCTTGGCATCAAGATTATATTCTTAACAGGAAGAACAGTGGATAAAGAAGATGTAACAAAAAGGAACTTAAAATCGGCTGGCTTCCACACATGGGAAAAGTTAATTCTCAAGGATCCATTTTTATATGGTGGTAAAAATGCACTTCAATACAAATCAGCTGAGAGAAAGAAGCTGGAGAAGGAGGGATACAGAATCATTGGAAACATTGGAGACCAATGGAGCGATATCCTGGGAGCCAACAAAGGCCATAGGACTTTTAAGCTGCCTAATCCCATGTACTACATTAATTAA 549 0.4044 MFSEQFGSDSKLVNQQAYFYARTLNIADKDVFVFSVDMTVLSNLPYYKDHGFGTEPYNATLYDAWVLLGEATTMRETKKLYDKLLALGIKIIFLTGRTVDKEDVTKRNLKSAGFHTWEKLILKDPFLYGGKNALQYKSAERKKLEKEGYRIIGNIGDQWSDILGANKGHRTFKLPNPMYYIN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3302 182 CDD HAD_VSP 1 181 - -
Ssu4g3302 182 Gene3D - 1 182 IPR023214 -
Ssu4g3302 182 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 1 181 - -
Ssu4g3302 182 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 3 181 IPR005519 -
Ssu4g3302 182 PANTHER VEGETATIVE STORAGE PROTEIN 1-RELATED 1 181 - -
Ssu4g3302 182 SUPERFAMILY HAD-like 27 179 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3302 Ssu-Chr4 83260102 83261816 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3302 - - gmx:547669 252.292